RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 CDC25BP30305 580 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 CHAF1AQ13111 956 aaPredicted RBP18.46■□□□□ 0.55
TRIM46-211ENST00000611379 WTAPQ15007 396 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 FILIP1Q7Z7B0 1213 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 MRFAP1L1Q96HT8 127 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
TRIM46-211ENST00000611379 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 JMYQ8N9B5 988 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 SDR42E1Q8WUS8 393 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 ROBO1Q9Y6N7 1651 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
TRIM46-211ENST00000611379 ISM2Q6H9L7 571 aa18.46■□□□□ 0.54
TRIM46-211ENST00000611379 NUP133Q8WUM0 1156 aa18.46■□□□□ 0.54
TRIM46-211ENST00000611379 STAG1Q8WVM7 1258 aa18.46■□□□□ 0.54
TRIM46-211ENST00000611379 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.54
TRIM46-211ENST00000611379 SYKP43405 635 aa18.45■□□□□ 0.54
TRIM46-211ENST00000611379 CMTR1Q8N1G2 835 aaKnown RBP18.45■□□□□ 0.54
TRIM46-211ENST00000611379 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRIM46-211ENST00000611379 GNL3LQ9NVN8 582 aaKnown RBP18.45■□□□□ 0.54
TRIM46-211ENST00000611379 RTN1Q16799 776 aa18.45■□□□□ 0.54
TRIM46-211ENST00000611379 TSC1Q92574 1164 aa18.45■□□□□ 0.54
TRIM46-211ENST00000611379 PDCL3Q9H2J4 239 aa18.45■□□□□ 0.54
TRIM46-211ENST00000611379 LRP5O75197 1615 aa18.45■□□□□ 0.54
TRIM46-211ENST00000611379 GUCY1A2P33402 732 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 ARID5BQ14865 1188 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 ADGRA1Q86SQ6 560 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 TRIM22Q8IYM9 498 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 RGS22Q8NE09 1264 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 CLIC6Q96NY7 704 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 RNF41Q9H4P4 317 aaPredicted RBP18.44■□□□□ 0.54
TRIM46-211ENST00000611379 MROH7-TTC4A0A0A0MT08 1334 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 SPATA31A5Q5VU36 1347 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 SPATA31A7Q8IWB4 1347 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 RTL9Q8NET4 1388 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 FMNL1O95466 1100 aaPredicted RBP18.44■□□□□ 0.54
TRIM46-211ENST00000611379 U2AF2P26368 475 aaKnown RBP eCLIP18.44■□□□□ 0.54
TRIM46-211ENST00000611379 PPARAQ07869 468 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 UBAC1Q9BSL1 405 aa18.44■□□□□ 0.54
TRIM46-211ENST00000611379 IFNAR1P17181 557 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 SAFBQ15424 915 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRIM46-211ENST00000611379 SMIM5Q71RC9 77 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 WASF1Q92558 559 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 MAGEB6P1A0A0J9YX57 407 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 PPP6R2O75170 966 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 PTPAQ15257 358 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 KCNJ14Q9UNX9 436 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 BTBD18B2RXH4 712 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 SHC4Q6S5L8 630 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 LRRC8AQ8IWT6 810 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 C16orf45Q96MC5 204 aaPredicted RBP18.43■□□□□ 0.54
TRIM46-211ENST00000611379 PLCH1Q4KWH8 1693 aa18.43■□□□□ 0.54
TRIM46-211ENST00000611379 CAVIN4Q5BKX8 364 aa18.42■□□□□ 0.54
TRIM46-211ENST00000611379 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
TRIM46-211ENST00000611379 MAP3K14Q99558 947 aa18.42■□□□□ 0.54
TRIM46-211ENST00000611379 NLRP12P59046 1061 aa18.42■□□□□ 0.54
TRIM46-211ENST00000611379 RBM6P78332 1123 aaKnown RBP18.42■□□□□ 0.54
TRIM46-211ENST00000611379 TMTC2Q8N394 836 aa18.42■□□□□ 0.54
TRIM46-211ENST00000611379 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
TRIM46-211ENST00000611379 DIS3L2Q8IYB7 885 aaKnown RBP18.41■□□□□ 0.54
TRIM46-211ENST00000611379 SMIM22K7EJ46 135 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 LINC00116Q8NCU8 138 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 C4AP0C0L4 1744 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 CCDC196A0A1B0GTZ2 297 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 SMC2O95347 1197 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
TRIM46-211ENST00000611379 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
TRIM46-211ENST00000611379 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
TRIM46-211ENST00000611379 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 BSDC1Q9NW68 430 aaPredicted RBP18.4■□□□□ 0.54
TRIM46-211ENST00000611379 MINPP1Q9UNW1 487 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 MMP1P03956 469 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 TPM4P67936 248 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 CRACR2BQ8N4Y2 399 aaPredicted RBP18.4■□□□□ 0.54
TRIM46-211ENST00000611379 ESR2Q92731 530 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 TIGD1Q96MW7 591 aa18.4■□□□□ 0.54
TRIM46-211ENST00000611379 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.54
TRIM46-211ENST00000611379 SKILP12757 684 aa18.39■□□□□ 0.54
TRIM46-211ENST00000611379 ATP2B1P20020 1258 aa18.39■□□□□ 0.54
TRIM46-211ENST00000611379 DYNLL1P63167 89 aaKnown RBP18.39■□□□□ 0.54
TRIM46-211ENST00000611379 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.54
TRIM46-211ENST00000611379 SPECC1Q5M775 1068 aa18.39■□□□□ 0.54
TRIM46-211ENST00000611379 BARGINQ6ZT62 677 aa18.39■□□□□ 0.54
TRIM46-211ENST00000611379 CELF1Q92879 486 aaKnown RBP18.39■□□□□ 0.54
TRIM46-211ENST00000611379 HPSEQ9Y251 543 aa18.39■□□□□ 0.54
TRIM46-211ENST00000611379 AHDC1Q5TGY3 1603 aaPredicted RBP18.39■□□□□ 0.53
TRIM46-211ENST00000611379 ZNF804BA4D1E1 1349 aa18.39■□□□□ 0.53
TRIM46-211ENST00000611379 RIOK3O14730 519 aaKnown RBP18.39■□□□□ 0.53
TRIM46-211ENST00000611379 PIP4K2BP78356 416 aa18.39■□□□□ 0.53
TRIM46-211ENST00000611379 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.39■□□□□ 0.53
TRIM46-211ENST00000611379 DDX60Q8IY21 1712 aaKnown RBP18.39■□□□□ 0.53
TRIM46-211ENST00000611379 CYP2D7A0A087X1C5 515 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 NEMFO60524 1076 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 CUTAO60888 179 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 PNOCQ13519 176 aa18.38■□□□□ 0.53
TRIM46-211ENST00000611379 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms