RNA–Protein interactions for RNA: ENST00000611152.1

TUBGCP3-207, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 1,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-207ENST00000611152 IQSEC3Q9UPP2 1182 aaPredicted RBP18.82■□□□□ 0.6
TUBGCP3-207ENST00000611152 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 LIG1P18858 919 aa18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 METAP2P50579 478 aaKnown RBP eCLIP18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 MIGA1Q8NAN2 632 aa18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 SENP2Q9HC62 589 aa18.81■□□□□ 0.6
TUBGCP3-207ENST00000611152 NPHP1O15259 732 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 ZBTB43O43298 467 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 KDM4AO75164 1064 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 ZBTB7AO95365 584 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 MMP10P09238 476 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 HOXA10P31260 410 aaPredicted RBP18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 BRAPQ7Z569 592 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 TMTC2Q8N394 836 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 C8orf76Q96K31 380 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 RTEL1Q9NZ71 1219 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 ABCF2Q9UG63 623 aa18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 BAZ2AQ9UIF9 1905 aaKnown RBP18.8■□□□□ 0.6
TUBGCP3-207ENST00000611152 CPLX1O14810 134 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 CDC27P30260 824 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 CLSTN2Q9H4D0 955 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 INCENPQ9NQS7 918 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 NAP1L2Q9ULW6 460 aaPredicted RBP18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 PARP3Q9Y6F1 533 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 XDHP47989 1333 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 POLRMTO00411 1230 aaKnown RBP18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 NT5C2P49902 561 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 MECOMQ03112 1051 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 DDR1Q08345 913 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 CPLX2Q6PUV4 134 aaKnown RBP18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 TDRD7Q8NHU6 1098 aaKnown RBP18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 USP28Q96RU2 1077 aa18.79■□□□□ 0.6
TUBGCP3-207ENST00000611152 IFIT3O14879 490 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 IFNAR1P17181 557 aa18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 SEC23AQ15436 765 aa18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 TXNRD3Q86VQ6 643 aa18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 NUP62CLQ9H1M0 184 aa18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 POLR3EQ9NVU0 708 aa18.78■□□□□ 0.6
TUBGCP3-207ENST00000611152 YEATS4O95619 227 aa18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 SERPINB2P05120 415 aa18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 POLD1P28340 1107 aa18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 SART3Q15020 963 aaKnown RBP18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 PPP2R5BQ15173 497 aa18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 SBK1Q52WX2 424 aa18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 SPTY2D1Q68D10 685 aaPredicted RBP18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.77■□□□□ 0.6
TUBGCP3-207ENST00000611152 GOLGA8AA7E2F4 631 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 ORC4O43929 436 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 RANBP6O60518 1105 aaKnown RBP18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 ANKRD31Q8N7Z5 1873 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 SDR42E1Q8WUS8 393 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 ATP8A2Q9NTI2 1148 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 DACT1Q9NYF0 836 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 SLC12A7Q9Y666 1083 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
TUBGCP3-207ENST00000611152 A0A1W2PQ27 194 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 A0A1W2PQ64 194 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 A0A1W2PQD8 194 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 FMNL1O95466 1100 aaPredicted RBP18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 ST5P78524 1137 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 MAP3K11Q16584 847 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 WDR66Q8TBY9 1149 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 ESR2Q92731 530 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 RRAGDQ9NQL2 400 aaPredicted RBP18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 PODXL2Q9NZ53 605 aa18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
TUBGCP3-207ENST00000611152 CCDC69A6NI79 296 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 WTAPQ15007 396 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 MYSM1Q5VVJ2 828 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 CTR9Q6PD62 1173 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 ENGASEQ8NFI3 743 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 BBOX1O75936 387 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 CCDC192P0DO97 292 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 U2AF2P26368 475 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■■■□ 23.4
TUBGCP3-207ENST00000611152 IARSP41252 1262 aaKnown RBP18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 PPP4CP60510 307 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 GUCY1B3Q02153 619 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 NFXL1Q6ZNB6 911 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 TMC4Q7Z404 712 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 NBPF11Q86T75 865 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 MICU3Q86XE3 530 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 LINC00301Q8NCQ3 95 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 ALG1Q9BT22 464 aa18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 CRNKL1Q9BZJ0 848 aaKnown RBP18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 DCP1AQ9NPI6 582 aaPredicted RBP18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
TUBGCP3-207ENST00000611152 DDX60LQ5H9U9 1706 aaKnown RBP18.73■□□□□ 0.59
TUBGCP3-207ENST00000611152 KIF28PB7ZC32 967 aa18.73■□□□□ 0.59
TUBGCP3-207ENST00000611152 ATP2B4P23634 1241 aa18.73■□□□□ 0.59
TUBGCP3-207ENST00000611152 PRDX5P30044 214 aa18.73■□□□□ 0.59
TUBGCP3-207ENST00000611152 KRT40Q6A162 431 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms