RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
SENP3-209ENST00000610454 DNAJC2Q99543 621 aaKnown RBP16.3■□□□□ 0.2
SENP3-209ENST00000610454 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
SENP3-209ENST00000610454 RFX7Q2KHR2 1363 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 LAMB1P07942 1786 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 CYP7A1P22680 504 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 RHBDL3P58872 404 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
SENP3-209ENST00000610454 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 CASP8AP2Q9UKL3 1982 aa16.29■□□□□ 0.2
SENP3-209ENST00000610454 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
SENP3-209ENST00000610454 ERO1BQ86YB8 467 aa16.28■□□□□ 0.2
SENP3-209ENST00000610454 ZFPM1Q8IX07 1006 aa16.28■□□□□ 0.2
SENP3-209ENST00000610454 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
SENP3-209ENST00000610454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.28■□□□□ 0.2
SENP3-209ENST00000610454 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
SENP3-209ENST00000610454 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
SENP3-209ENST00000610454 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
SENP3-209ENST00000610454 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
SENP3-209ENST00000610454 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
SENP3-209ENST00000610454 GTF2A2P52657 109 aa16.27■□□□□ 0.2
SENP3-209ENST00000610454 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
SENP3-209ENST00000610454 SH3RF3Q8TEJ3 882 aaPredicted RBP16.27■□□□□ 0.2
SENP3-209ENST00000610454 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
SENP3-209ENST00000610454 DCTPP1Q9H773 170 aa16.27■□□□□ 0.2
SENP3-209ENST00000610454 SNCAIPQ9Y6H5 919 aa16.27■□□□□ 0.2
SENP3-209ENST00000610454 DDTLA6NHG4 134 aaPredicted RBP16.26■□□□□ 0.19
SENP3-209ENST00000610454 GOLIM4O00461 696 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 SMARCA5O60264 1052 aaPredicted RBP16.26■□□□□ 0.19
SENP3-209ENST00000610454 INPP5BP32019 993 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 GJA5P36382 358 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 PPP4CP60510 307 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
SENP3-209ENST00000610454 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
SENP3-209ENST00000610454 ATRNL1Q5VV63 1379 aa16.26■□□□□ 0.19
SENP3-209ENST00000610454 FOCADQ5VW36 1801 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 ATP5JP18859 108 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 PPIL2Q13356 520 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 ADGRA1Q86SQ6 560 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 TGFBRAP1Q8WUH2 860 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.19
SENP3-209ENST00000610454 DHX36Q9H2U1 1008 aaKnown RBP16.25■□□□□ 0.19
SENP3-209ENST00000610454 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 PAG1Q9NWQ8 432 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
SENP3-209ENST00000610454 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 CETPP11597 493 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 USP5P45974 858 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 PPATQ06203 517 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 SNAPC2Q13487 334 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 AAMPQ13685 434 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 CCL15Q16663 113 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 SLC9C2Q5TAH2 1124 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 MAPKAPK5Q8IW41 473 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
SENP3-209ENST00000610454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.24■□□□□ 0.19
SENP3-209ENST00000610454 FLT1P17948 1338 aa16.23■□□□□ 0.19
SENP3-209ENST00000610454 DOCK1Q14185 1865 aa16.23■□□□□ 0.19
SENP3-209ENST00000610454 IGF2BP3O00425 579 aaKnown RBP eCLIP16.23■□□□□ 0.19
SENP3-209ENST00000610454 NOL9Q5SY16 702 aaKnown RBP16.23■□□□□ 0.19
SENP3-209ENST00000610454 SCYL3Q8IZE3 742 aa16.23■□□□□ 0.19
SENP3-209ENST00000610454 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
SENP3-209ENST00000610454 MAGEB6P1A0A0J9YX57 407 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 IRF6O14896 467 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 TBC1D12O60347 775 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 HLA-DOAP06340 250 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 PDE6AP16499 860 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
SENP3-209ENST00000610454 CRACR2BQ8N4Y2 399 aaPredicted RBP16.22■□□□□ 0.19
SENP3-209ENST00000610454 MS4A4AQ96JQ5 239 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 HAUS7Q99871 368 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
SENP3-209ENST00000610454 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
SENP3-209ENST00000610454 MYH7P12883 1935 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.19
SENP3-209ENST00000610454 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 GPR25O00155 361 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
SENP3-209ENST00000610454 CAPN15O75808 1086 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 DGKZQ13574 1117 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 BRI3BPQ8WY22 251 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 EDC3Q96F86 508 aaKnown RBP16.21■□□□□ 0.19
SENP3-209ENST00000610454 MYH1P12882 1939 aa16.21■□□□□ 0.19
SENP3-209ENST00000610454 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
SENP3-209ENST00000610454 MAP3K10Q02779 954 aa16.2■□□□□ 0.18
SENP3-209ENST00000610454 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
SENP3-209ENST00000610454 NOM1Q5C9Z4 860 aaKnown RBP16.2■□□□□ 0.18
SENP3-209ENST00000610454 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms