RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 CD96P40200 585 aa6.65□□□□□ -1.34
CCDC144B-206ENST00000609959 ZNF211Q13398 564 aaPredicted RBP6.65□□□□□ -1.34
CCDC144B-206ENST00000609959 USPL1Q5W0Q7 1092 aa6.65□□□□□ -1.34
CCDC144B-206ENST00000609959 DNAJC25Q9H1X3 360 aa6.65□□□□□ -1.34
CCDC144B-206ENST00000609959 GTF2IRD1Q9UHL9 959 aa6.65□□□□□ -1.34
CCDC144B-206ENST00000609959 LEFTY1O75610 366 aa6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 MESP2Q0VG99 397 aa6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 MLANAQ16655 118 aa6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 B4GALNT3Q6L9W6 998 aa6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 CITED4Q96RK1 184 aa6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 ABCB6Q9NP58 842 aa6.64□□□□□ -1.35
CCDC144B-206ENST00000609959 ZNF862O60290 1169 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 ICMTO60725 284 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 ITIH2P19823 946 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 AFMP43652 599 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 ZNF157P51786 506 aaPredicted RBP6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 IKZF1Q13422 519 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 GLYCTKQ8IVS8 523 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 KCNB2Q92953 911 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 TNKS2Q9H2K2 1166 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 TMEM39AQ9NV64 488 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 PLAGL2Q9UPG8 496 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 GTF3C3Q9Y5Q9 886 aa6.63□□□□□ -1.35
CCDC144B-206ENST00000609959 ZP2Q05996 745 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 ANKLE2Q86XL3 938 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 TOP6BLQ8N6T0 577 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 KRTAP4-2Q9BYR5 136 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 GPN3Q9UHW5 284 aaPredicted RBP6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 PCDHGC5Q9Y5F6 944 aa6.62□□□□□ -1.35
CCDC144B-206ENST00000609959 IGF2BP3O00425 579 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC144B-206ENST00000609959 TSPAN15O95858 294 aa6.61□□□□□ -1.35
CCDC144B-206ENST00000609959 ORC1Q13415 861 aa6.61□□□□□ -1.35
CCDC144B-206ENST00000609959 PHLDB3Q6NSJ2 640 aa6.61□□□□□ -1.35
CCDC144B-206ENST00000609959 EMILIN2Q9BXX0 1053 aa6.61□□□□□ -1.35
CCDC144B-206ENST00000609959 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 ERVK-24P63145 666 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 FAAP100Q0VG06 881 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 SIAH1Q8IUQ4 282 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 TMC1Q8TDI8 760 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 ISL2Q96A47 359 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 U3KQE9 123 aa6.6□□□□□ -1.35
CCDC144B-206ENST00000609959 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 GNAT3A8MTJ3 354 aa6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 H3BRB1 525 aa6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 TUT1Q9H6E5 874 aaKnown RBP6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 LMCD1Q9NZU5 365 aa6.59□□□□□ -1.35
CCDC144B-206ENST00000609959 EIF1AYO14602 144 aaKnown RBP6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 NEFMP07197 916 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 CLCN7P51798 805 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 ZC3H12AQ5D1E8 599 aaKnown RBP6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 SYDE1Q6ZW31 735 aaPredicted RBP6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 CCDC82Q8N4S0 544 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 NLRP2Q9NX02 1062 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 CTNND2Q9UQB3 1225 aa6.58□□□□□ -1.36
CCDC144B-206ENST00000609959 GLI1P08151 1106 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 ARNTP27540 789 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 CFPP27918 469 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 FCGRTP55899 365 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 GRM2Q14416 872 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 TMEM67Q5HYA8 995 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 PDZD3Q86UT5 571 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 SULF2Q8IWU5 870 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 LRRC56Q8IYG6 542 aaPredicted RBP6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 ACSBG1Q96GR2 724 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 CCDC120Q96HB5 630 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 C1orf115Q9H7X2 142 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 PRDM10Q9NQV6 1147 aa6.57□□□□□ -1.36
CCDC144B-206ENST00000609959 NFIBO00712 420 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 MAP1SQ66K74 1059 aaPredicted RBP6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 LILRA6Q6PI73 481 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 CDC37L1Q7L3B6 337 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 CYFIP1Q7L576 1253 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 SPACA3Q8IXA5 215 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 KCT2Q8NC54 265 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 LIN37Q96GY3 246 aaPredicted RBP6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 KIRREL1Q96J84 757 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 DMRTB1Q96MA1 342 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 NIF3L1Q9GZT8 377 aa6.56□□□□□ -1.36
CCDC144B-206ENST00000609959 NME2P22392 152 aa6.55□□□□□ -1.36
CCDC144B-206ENST00000609959 CSRNP1Q96S65 589 aa6.55□□□□□ -1.36
CCDC144B-206ENST00000609959 FOXQ1Q9C009 403 aa6.55□□□□□ -1.36
CCDC144B-206ENST00000609959 SAMM50Q9Y512 469 aa6.55□□□□□ -1.36
CCDC144B-206ENST00000609959 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
CCDC144B-206ENST00000609959 ZNF865P0CJ78 1059 aaPredicted RBP6.54□□□□□ -1.36
CCDC144B-206ENST00000609959 ZSCAN22P10073 491 aaPredicted RBP6.54□□□□□ -1.36
CCDC144B-206ENST00000609959 ARHGAP4P98171 946 aa6.54□□□□□ -1.36
CCDC144B-206ENST00000609959 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
CCDC144B-206ENST00000609959 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
CCDC144B-206ENST00000609959 CBX8Q9HC52 389 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms