RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
CTCFL-220ENST00000608858 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 CYP2B6P20813 491 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 CASP7P55210 303 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 FOXO4P98177 505 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 MAP3K12Q12852 859 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 TAF7LQ5H9L4 462 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 CCDC30Q5VVM6 783 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 FASTKD5Q7L8L6 764 aaKnown RBP11.83□□□□□ -0.52
CTCFL-220ENST00000608858 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-220ENST00000608858 FAM83AQ86UY5 434 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 ZFPM1Q8IX07 1006 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 PLA2G12BQ9BX93 195 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-220ENST00000608858 ZNF112Q9UJU3 913 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 GJD2Q9UKL4 321 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
CTCFL-220ENST00000608858 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 PEX10O60683 326 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 HMGCRP04035 888 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-220ENST00000608858 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 LMBR1LQ6UX01 489 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 VPS37DQ86XT2 251 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 USP38Q8NB14 1042 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 PUS3Q9BZE2 481 aaKnown RBP11.82□□□□□ -0.52
CTCFL-220ENST00000608858 SENP6Q9GZR1 1112 aaPredicted RBP11.82□□□□□ -0.52
CTCFL-220ENST00000608858 DDX60LQ5H9U9 1706 aaKnown RBP11.82□□□□□ -0.52
CTCFL-220ENST00000608858 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
CTCFL-220ENST00000608858 TRIM75PA6NK02 468 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 FAM151AQ8WW52 585 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 ZDHHC15Q96MV8 337 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 PICK1Q9NRD5 415 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 AFG3L2Q9Y4W6 797 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 MUC3AQ02505 3323 aa11.81□□□□□ -0.52
CTCFL-220ENST00000608858 A0A0G2JLL6 359 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-220ENST00000608858 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
CTCFL-220ENST00000608858 PTPRAP18433 802 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-220ENST00000608858 NFIAQ12857 509 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 CCDC57Q2TAC2 916 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 TREML2Q5T2D2 321 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 PRRT2Q7Z6L0 340 aaPredicted RBP11.8□□□□□ -0.52
CTCFL-220ENST00000608858 TRIB2Q92519 343 aa11.8□□□□□ -0.52
CTCFL-220ENST00000608858 COL6A1P12109 1028 aa11.79□□□□□ -0.52
CTCFL-220ENST00000608858 HDLBPQ00341 1268 aaKnown RBP11.79□□□□□ -0.52
CTCFL-220ENST00000608858 DNAH12Q6ZR08 3092 aa11.79□□□□□ -0.52
CTCFL-220ENST00000608858 CDH23Q9H251 3354 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 CACNB2Q08289 660 aaPredicted RBP11.78□□□□□ -0.52
CTCFL-220ENST00000608858 UBE4AQ14139 1066 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 NOL9Q5SY16 702 aaKnown RBP11.78□□□□□ -0.52
CTCFL-220ENST00000608858 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 LHX8Q68G74 356 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 CDC42EP5Q6NZY7 148 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 FBXO33Q7Z6M2 555 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 USP40Q9NVE5 1235 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 PRKAG2Q9UGJ0 569 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 ADAMTS8Q9UP79 889 aa11.78□□□□□ -0.52
CTCFL-220ENST00000608858 CCL14Q16627 93 aa11.77□□□□□ -0.53
CTCFL-220ENST00000608858 SCYL3Q8IZE3 742 aa11.77□□□□□ -0.53
CTCFL-220ENST00000608858 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
CTCFL-220ENST00000608858 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.53
CTCFL-220ENST00000608858 PRDM5Q9NQX1 630 aaPredicted RBP11.77□□□□□ -0.53
CTCFL-220ENST00000608858 FAM198AQ9UFP1 575 aa11.77□□□□□ -0.53
CTCFL-220ENST00000608858 GNAI1P63096 354 aa11.76□□□□□ -0.53
CTCFL-220ENST00000608858 DIXDC1Q155Q3 683 aa11.76□□□□□ -0.53
CTCFL-220ENST00000608858 CCDC85BQ15834 202 aaPredicted RBP11.76□□□□□ -0.53
CTCFL-220ENST00000608858 ZSCAN29Q8IWY8 852 aaPredicted RBP11.76□□□□□ -0.53
CTCFL-220ENST00000608858 TBC1D22AQ8WUA7 517 aa11.76□□□□□ -0.53
CTCFL-220ENST00000608858 BADQ92934 168 aa11.76□□□□□ -0.53
CTCFL-220ENST00000608858 MRIQ9BWK5 157 aa11.76□□□□□ -0.53
CTCFL-220ENST00000608858 ATP11BQ9Y2G3 1177 aa11.76□□□□□ -0.53
CTCFL-220ENST00000608858 LRRFIP2Q9Y608 721 aaKnown RBP11.76□□□□□ -0.53
CTCFL-220ENST00000608858 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 HHIPL2Q6UWX4 724 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 ADAMTS19Q8TE59 1207 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 DNAAF4Q8WXU2 420 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 TSR2Q969E8 191 aaKnown RBP11.75□□□□□ -0.53
CTCFL-220ENST00000608858 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 AGTPBP1Q9UPW5 1226 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 SLC45A1Q9Y2W3 748 aa11.75□□□□□ -0.53
CTCFL-220ENST00000608858 F6X3S4 739 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 APAF1O14727 1248 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 RTP1P59025 263 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 SPP2Q13103 211 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 FKBP5Q13451 457 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-220ENST00000608858 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTCFL-220ENST00000608858 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 MAP3K21Q5TCX8 1036 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 NECAB3Q96P71 396 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-220ENST00000608858 DAGLAQ9Y4D2 1042 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms