RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CLASRPQ8N2M8 674 aaKnown RBP23.47■■□□□ 1.35
CTSA-217ENST00000607482 PICK1Q9NRD5 415 aa23.47■■□□□ 1.35
CTSA-217ENST00000607482 SNCAIPQ9Y6H5 919 aa23.47■■□□□ 1.35
CTSA-217ENST00000607482 INPP5BP32019 993 aa23.46■■□□□ 1.35
CTSA-217ENST00000607482 NOM1Q5C9Z4 860 aaKnown RBP23.46■■□□□ 1.35
CTSA-217ENST00000607482 TEX11Q8IYF3 940 aa23.46■■□□□ 1.35
CTSA-217ENST00000607482 ZNF512BQ96KM6 892 aaPredicted RBP23.46■■□□□ 1.35
CTSA-217ENST00000607482 CFHR5Q9BXR6 569 aa23.46■■□□□ 1.35
CTSA-217ENST00000607482 IL1RAPL2Q9NP60 686 aa23.46■■□□□ 1.35
CTSA-217ENST00000607482 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
CTSA-217ENST00000607482 IFIT2P09913 472 aaKnown RBP23.45■■□□□ 1.34
CTSA-217ENST00000607482 PLCG2P16885 1265 aa23.45■■□□□ 1.34
CTSA-217ENST00000607482 ZAP70P43403 619 aa23.45■■□□□ 1.34
CTSA-217ENST00000607482 PPATQ06203 517 aa23.45■■□□□ 1.34
CTSA-217ENST00000607482 PPIL2Q13356 520 aa23.45■■□□□ 1.34
CTSA-217ENST00000607482 PKN2Q16513 984 aaKnown RBP23.45■■□□□ 1.34
CTSA-217ENST00000607482 RHPN1Q8TCX5 695 aa23.45■■□□□ 1.34
CTSA-217ENST00000607482 KIF1BPQ96EK5 621 aa23.45■■□□□ 1.34
CTSA-217ENST00000607482 TESPA1A2RU30 521 aaPredicted RBP23.44■■□□□ 1.34
CTSA-217ENST00000607482 IDH1O75874 414 aaKnown RBP23.44■■□□□ 1.34
CTSA-217ENST00000607482 CYP2E1P05181 493 aaPredicted RBP23.44■■□□□ 1.34
CTSA-217ENST00000607482 CRHR2Q13324 411 aa23.44■■□□□ 1.34
CTSA-217ENST00000607482 TAF1CQ15572 869 aaPredicted RBP23.44■■□□□ 1.34
CTSA-217ENST00000607482 BRI3BPQ8WY22 251 aa23.44■■□□□ 1.34
CTSA-217ENST00000607482 MS4A4AQ96JQ5 239 aa23.44■■□□□ 1.34
CTSA-217ENST00000607482 R3HDMLQ9H3Y0 253 aa23.44■■□□□ 1.34
CTSA-217ENST00000607482 ZFYVE28Q9HCC9 887 aa23.44■■□□□ 1.34
CTSA-217ENST00000607482 AATFQ9NY61 560 aaKnown RBP eCLIP23.44■■□□□ 1.34
CTSA-217ENST00000607482 OTOFQ9HC10 1997 aa23.43■■□□□ 1.34
CTSA-217ENST00000607482 IRF6O14896 467 aa23.43■■□□□ 1.34
CTSA-217ENST00000607482 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
CTSA-217ENST00000607482 PTPN18Q99952 460 aa23.43■■□□□ 1.34
CTSA-217ENST00000607482 RAB11FIP3O75154 756 aa23.42■■□□□ 1.34
CTSA-217ENST00000607482 C20orf194Q5TEA3 1177 aa23.42■■□□□ 1.34
CTSA-217ENST00000607482 ERO1AQ96HE7 468 aa23.42■■□□□ 1.34
CTSA-217ENST00000607482 TRIM34Q9BYJ4 488 aa23.42■■□□□ 1.34
CTSA-217ENST00000607482 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
CTSA-217ENST00000607482 ZNF112Q9UJU3 913 aa23.42■■□□□ 1.34
CTSA-217ENST00000607482 DDTLA6NHG4 134 aaPredicted RBP23.41■■□□□ 1.34
CTSA-217ENST00000607482 IGSF3O75054 1194 aa23.41■■□□□ 1.34
CTSA-217ENST00000607482 RHBDL3P58872 404 aa23.41■■□□□ 1.34
CTSA-217ENST00000607482 MAP3K12Q12852 859 aa23.41■■□□□ 1.34
CTSA-217ENST00000607482 SH3RF3Q8TEJ3 882 aaPredicted RBP23.41■■□□□ 1.34
CTSA-217ENST00000607482 ZNF384Q8TF68 577 aa23.41■■□□□ 1.34
CTSA-217ENST00000607482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.41■■□□□ 1.34
CTSA-217ENST00000607482 CYP7A1P22680 504 aa23.4■■□□□ 1.34
CTSA-217ENST00000607482 ARHGEF6Q15052 776 aa23.4■■□□□ 1.34
CTSA-217ENST00000607482 PIH1D3Q9NQM4 214 aaKnown RBP23.4■■□□□ 1.34
CTSA-217ENST00000607482 NPM3O75607 178 aaKnown RBP23.39■■□□□ 1.33
CTSA-217ENST00000607482 SP3Q02447 781 aa23.39■■□□□ 1.33
CTSA-217ENST00000607482 NOL9Q5SY16 702 aaKnown RBP23.39■■□□□ 1.33
CTSA-217ENST00000607482 SH3BP5LQ7L8J4 393 aa23.39■■□□□ 1.33
CTSA-217ENST00000607482 SCYL3Q8IZE3 742 aa23.39■■□□□ 1.33
CTSA-217ENST00000607482 TRIM17Q9Y577 477 aa23.39■■□□□ 1.33
CTSA-217ENST00000607482 TTF1Q15361 905 aaPredicted RBP23.38■■□□□ 1.33
CTSA-217ENST00000607482 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
CTSA-217ENST00000607482 MAGEB6Q8N7X4 407 aa23.38■■□□□ 1.33
CTSA-217ENST00000607482 OSBPL5Q9H0X9 879 aaPredicted RBP23.38■■□□□ 1.33
CTSA-217ENST00000607482 ZHX2Q9Y6X8 837 aa23.38■■□□□ 1.33
CTSA-217ENST00000607482 CTNND1O60716 968 aaKnown RBP23.37■■□□□ 1.33
CTSA-217ENST00000607482 SIRT2Q8IXJ6 389 aa23.37■■□□□ 1.33
CTSA-217ENST00000607482 TGFBRAP1Q8WUH2 860 aa23.37■■□□□ 1.33
CTSA-217ENST00000607482 DNAJC2Q99543 621 aaKnown RBP23.37■■□□□ 1.33
CTSA-217ENST00000607482 DHX36Q9H2U1 1008 aaKnown RBP23.37■■□□□ 1.33
CTSA-217ENST00000607482 NDUFB9Q9Y6M9 179 aa23.37■■□□□ 1.33
CTSA-217ENST00000607482 PHF20L1A8MW92 1017 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 BTBD19C9JJ37 291 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 PPP4CP60510 307 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 KIF22Q14807 665 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 FBXO46Q6PJ61 603 aaPredicted RBP23.36■■□□□ 1.33
CTSA-217ENST00000607482 CERS3Q8IU89 383 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 MAPKAPK5Q8IW41 473 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 CRACR2BQ8N4Y2 399 aaPredicted RBP23.36■■□□□ 1.33
CTSA-217ENST00000607482 ZCCHC17Q9NP64 241 aaKnown RBP23.36■■□□□ 1.33
CTSA-217ENST00000607482 HPS5Q9UPZ3 1129 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 RFX7Q2KHR2 1363 aa23.36■■□□□ 1.33
CTSA-217ENST00000607482 TBC1D12O60347 775 aa23.35■■□□□ 1.33
CTSA-217ENST00000607482 USP5P45974 858 aa23.35■■□□□ 1.33
CTSA-217ENST00000607482 MIGA1Q8NAN2 632 aa23.35■■□□□ 1.33
CTSA-217ENST00000607482 CD99L2Q8TCZ2 262 aa23.35■■□□□ 1.33
CTSA-217ENST00000607482 EFCC1Q9HA90 598 aa23.35■■□□□ 1.33
CTSA-217ENST00000607482 PI4KBQ9UBF8 816 aa23.35■■□□□ 1.33
CTSA-217ENST00000607482 DOCK2Q92608 1830 aa23.34■■□□□ 1.33
CTSA-217ENST00000607482 CXCL11O14625 94 aa23.34■■□□□ 1.33
CTSA-217ENST00000607482 PTPRAP18433 802 aa23.34■■□□□ 1.33
CTSA-217ENST00000607482 FASTKD5Q7L8L6 764 aaKnown RBP23.34■■□□□ 1.33
CTSA-217ENST00000607482 LRRCC1Q9C099 1032 aa23.34■■□□□ 1.33
CTSA-217ENST00000607482 ATRNL1Q5VV63 1379 aa23.34■■□□□ 1.33
CTSA-217ENST00000607482 FAM196BA6NMK8 535 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 PDHXO00330 501 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 HLA-DOAP06340 250 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 TMED8Q6PL24 325 aaPredicted RBP23.33■■□□□ 1.33
CTSA-217ENST00000607482 GADL1Q6ZQY3 521 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 ANKRD23Q86SG2 305 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 ADGRA1Q86SQ6 560 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 ANTXR1Q9H6X2 564 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 HERC5Q9UII4 1024 aaKnown RBP23.33■■□□□ 1.33
CTSA-217ENST00000607482 KCNH4Q9UQ05 1017 aa23.33■■□□□ 1.33
CTSA-217ENST00000607482 TRIM75PA6NK02 468 aa23.32■■□□□ 1.32
CTSA-217ENST00000607482 GOLIM4O00461 696 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms