RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TFRCP02786 760 aaKnown RBP18.76■□□□□ 0.59
SSBP4-214ENST00000607020 INHAP05111 366 aa18.76■□□□□ 0.59
SSBP4-214ENST00000607020 BMP8BP34820 402 aa18.76■□□□□ 0.59
SSBP4-214ENST00000607020 GPR153Q6NV75 609 aa18.76■□□□□ 0.59
SSBP4-214ENST00000607020 ZFPM1Q8IX07 1006 aa18.76■□□□□ 0.59
SSBP4-214ENST00000607020 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-214ENST00000607020 A0A0C4DFX4 3053 aa18.75■□□□□ 0.59
SSBP4-214ENST00000607020 PRDX5P30044 214 aa18.75■□□□□ 0.59
SSBP4-214ENST00000607020 RFX5P48382 616 aaPredicted RBP18.75■□□□□ 0.59
SSBP4-214ENST00000607020 DEFB118Q96PH6 123 aa18.75■□□□□ 0.59
SSBP4-214ENST00000607020 USP44Q9H0E7 712 aa18.75■□□□□ 0.59
SSBP4-214ENST00000607020 PICK1Q9NRD5 415 aa18.75■□□□□ 0.59
SSBP4-214ENST00000607020 STAP2Q9UGK3 403 aa18.75■□□□□ 0.59
SSBP4-214ENST00000607020 TNPO2O14787 897 aaKnown RBP18.74■□□□□ 0.59
SSBP4-214ENST00000607020 CTNND1O60716 968 aaKnown RBP18.74■□□□□ 0.59
SSBP4-214ENST00000607020 LDHBP07195 334 aaKnown RBP18.74■□□□□ 0.59
SSBP4-214ENST00000607020 ELNP15502 786 aa18.74■□□□□ 0.59
SSBP4-214ENST00000607020 FBXO3Q9UK99 471 aa18.74■□□□□ 0.59
SSBP4-214ENST00000607020 SEMA3EO15041 775 aa18.73■□□□□ 0.59
SSBP4-214ENST00000607020 ATG9AQ7Z3C6 839 aa18.73■□□□□ 0.59
SSBP4-214ENST00000607020 LRCH3Q96II8 777 aa18.73■□□□□ 0.59
SSBP4-214ENST00000607020 GDF15Q99988 308 aa18.73■□□□□ 0.59
SSBP4-214ENST00000607020 GNL3LQ9NVN8 582 aaKnown RBP18.73■□□□□ 0.59
SSBP4-214ENST00000607020 SH3BP5LQ7L8J4 393 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 NECAB2Q7Z6G3 386 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 MRPL50Q8N5N7 158 aaKnown RBP18.72■□□□□ 0.59
SSBP4-214ENST00000607020 ANKLE1Q8NAG6 615 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 COA7Q96BR5 231 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 FAM163AQ96GL9 167 aaPredicted RBP18.72■□□□□ 0.59
SSBP4-214ENST00000607020 PAWRQ96IZ0 340 aaKnown RBP18.72■□□□□ 0.59
SSBP4-214ENST00000607020 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 GAKO14976 1311 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 PTPRCP08575 1304 aa18.72■□□□□ 0.59
SSBP4-214ENST00000607020 LAMA3Q16787 3333 aa18.71■□□□□ 0.59
SSBP4-214ENST00000607020 RGS3P49796 1198 aa18.71■□□□□ 0.59
SSBP4-214ENST00000607020 MNX1P50219 401 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-214ENST00000607020 GADL1Q6ZQY3 521 aa18.71■□□□□ 0.59
SSBP4-214ENST00000607020 SMCR8Q8TEV9 937 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-214ENST00000607020 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
SSBP4-214ENST00000607020 AGTPBP1Q9UPW5 1226 aa18.71■□□□□ 0.59
SSBP4-214ENST00000607020 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
SSBP4-214ENST00000607020 CIAO1O76071 339 aa18.7■□□□□ 0.58
SSBP4-214ENST00000607020 FAM110CQ1W6H9 321 aa18.7■□□□□ 0.58
SSBP4-214ENST00000607020 RFX7Q2KHR2 1363 aa18.69■□□□□ 0.58
SSBP4-214ENST00000607020 TBC1D12O60347 775 aa18.69■□□□□ 0.58
SSBP4-214ENST00000607020 ZGPATQ8N5A5 531 aaKnown RBP18.69■□□□□ 0.58
SSBP4-214ENST00000607020 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.69■□□□□ 0.585e-6■■■□□ 19.2
SSBP4-214ENST00000607020 CEP126Q9P2H0 1117 aa18.69■□□□□ 0.58
SSBP4-214ENST00000607020 CUL9Q8IWT3 2517 aa18.69■□□□□ 0.58
SSBP4-214ENST00000607020 COL6A3P12111 3177 aa18.69■□□□□ 0.58
SSBP4-214ENST00000607020 DDTLA6NHG4 134 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-214ENST00000607020 NPM3O75607 178 aaKnown RBP18.68■□□□□ 0.58
SSBP4-214ENST00000607020 ATP2B3Q16720 1220 aa18.68■□□□□ 0.58
SSBP4-214ENST00000607020 LRIT3Q3SXY7 679 aa18.68■□□□□ 0.58
SSBP4-214ENST00000607020 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
SSBP4-214ENST00000607020 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
SSBP4-214ENST00000607020 PNMA3Q9UL41 463 aa18.68■□□□□ 0.58
SSBP4-214ENST00000607020 TRIM75PA6NK02 468 aa18.67■□□□□ 0.58
SSBP4-214ENST00000607020 GCLCP48506 637 aaPredicted RBP18.67■□□□□ 0.58
SSBP4-214ENST00000607020 ZSCAN29Q8IWY8 852 aaPredicted RBP18.67■□□□□ 0.58
SSBP4-214ENST00000607020 SLF2Q8IX21 1173 aa18.67■□□□□ 0.58
SSBP4-214ENST00000607020 DIS3LQ8TF46 1054 aaKnown RBP18.67■□□□□ 0.58
SSBP4-214ENST00000607020 GJD2Q9UKL4 321 aa18.67■□□□□ 0.58
SSBP4-214ENST00000607020 PDS5AQ29RF7 1337 aaKnown RBP18.67■□□□□ 0.58
SSBP4-214ENST00000607020 RPTORQ8N122 1335 aa18.67■□□□□ 0.58
SSBP4-214ENST00000607020 HMGCRP04035 888 aa18.66■□□□□ 0.58
SSBP4-214ENST00000607020 PHKA1P46020 1223 aa18.66■□□□□ 0.58
SSBP4-214ENST00000607020 TBC1D2Q9BYX2 928 aa18.66■□□□□ 0.58
SSBP4-214ENST00000607020 NBPF3Q9H094 633 aa18.66■□□□□ 0.58
SSBP4-214ENST00000607020 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
SSBP4-214ENST00000607020 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
SSBP4-214ENST00000607020 DEFB123Q8N688 67 aa18.65■□□□□ 0.58
SSBP4-214ENST00000607020 STXBP5LQ9Y2K9 1186 aa18.65■□□□□ 0.58
SSBP4-214ENST00000607020 ZNF521Q96K83 1311 aa18.65■□□□□ 0.58
SSBP4-214ENST00000607020 MAP4K4O95819 1239 aaPredicted RBP18.64■□□□□ 0.57
SSBP4-214ENST00000607020 SLURP2P0DP57 97 aa18.64■□□□□ 0.57
SSBP4-214ENST00000607020 IL15P40933 162 aaPredicted RBP18.64■□□□□ 0.57
SSBP4-214ENST00000607020 CCDC102BQ68D86 513 aa18.64■□□□□ 0.57
SSBP4-214ENST00000607020 OSBPL5Q9H0X9 879 aaPredicted RBP18.64■□□□□ 0.57
SSBP4-214ENST00000607020 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
SSBP4-214ENST00000607020 OGDHLQ9ULD0 1010 aa18.64■□□□□ 0.57
SSBP4-214ENST00000607020 GPR75-ASB3A0A0A6YYF3 556 aa18.63■□□□□ 0.57
SSBP4-214ENST00000607020 RHBDL3P58872 404 aa18.63■□□□□ 0.57
SSBP4-214ENST00000607020 PABPC4Q13310 644 aaKnown RBP eCLIP18.63■□□□□ 0.57
SSBP4-214ENST00000607020 SPTY2D1Q68D10 685 aaPredicted RBP18.63■□□□□ 0.57
SSBP4-214ENST00000607020 C7orf61Q8IZ16 206 aa18.63■□□□□ 0.57
SSBP4-214ENST00000607020 TAOK2Q9UL54 1235 aa18.63■□□□□ 0.57
SSBP4-214ENST00000607020 BTDP43251 543 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 SPP2Q13103 211 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 SH3D19Q5HYK7 790 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 MAP3K21Q5TCX8 1036 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 DZIP1Q86YF9 867 aaKnown RBP18.62■□□□□ 0.57
SSBP4-214ENST00000607020 TDHQ8IZJ6 230 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 ZNF280CQ8ND82 737 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 SSH1Q8WYL5 1049 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 SIL1Q9H173 461 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 C11orf49Q9H6J7 331 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 MORF4L1Q9UBU8 362 aa18.62■□□□□ 0.57
SSBP4-214ENST00000607020 ZMYND8Q9ULU4 1186 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms