RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SLC4A8Q2Y0W8 1093 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 PNMA8AQ86V59 439 aaPredicted RBP9.21□□□□□ -0.94
MSH6-211ENST00000606499 CERS3Q8IU89 383 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 CDAN1Q8IWY9 1227 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 ZFPM1Q8IX07 1006 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 TMOD2Q9NZR1 351 aa9.21□□□□□ -0.94
MSH6-211ENST00000606499 SAP30BPQ9UHR5 308 aaKnown RBP9.21□□□□□ -0.94
MSH6-211ENST00000606499 COL2A1P02458 1487 aaPredicted RBP9.21□□□□□ -0.94
MSH6-211ENST00000606499 SSC5DA1L4H1 1573 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 PAPPA2Q9BXP8 1791 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 ADM5C9JUS6 153 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 SEC24BO95487 1268 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 APPP05067 770 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 HSPD1P10809 573 aaKnown RBP9.2□□□□□ -0.94
MSH6-211ENST00000606499 GNAT2P19087 354 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 PTH1RQ03431 593 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 EVX2Q03828 476 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 DLK2Q6UY11 383 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 APOBEC3FQ8IUX4 373 aaKnown RBP9.2□□□□□ -0.94
MSH6-211ENST00000606499 IDI2Q9BXS1 227 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 TMEM39BQ9GZU3 492 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 OSBPL5Q9H0X9 879 aaPredicted RBP9.2□□□□□ -0.94
MSH6-211ENST00000606499 DCP1AQ9NPI6 582 aaPredicted RBP9.2□□□□□ -0.94
MSH6-211ENST00000606499 ANO2Q9NQ90 1003 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 OTOFQ9HC10 1997 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 PITPNM2Q9BZ72 1349 aa9.2□□□□□ -0.94
MSH6-211ENST00000606499 ATAD5Q96QE3 1844 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 CYP2D7A0A087X1C5 515 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 PATL2C9JE40 543 aaKnown RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 SMIM22K7EJ46 135 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 KIF3CO14782 793 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 CYP2D6P10635 497 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 TDO2P48775 406 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 RASA3Q14644 834 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 FKBP1CQ5VVH2 108 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 SH3BP5LQ7L8J4 393 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 LDHDQ86WU2 507 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 ZNF784Q8NCA9 323 aaPredicted RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 FAM151AQ8WW52 585 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 DCPSQ96C86 337 aaKnown RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 LSG1Q9H089 658 aaKnown RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 ATP8A2Q9NTI2 1148 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 MKRN1Q9UHC7 482 aaKnown RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 PGAP2Q9UHJ9 254 aa9.19□□□□□ -0.94
MSH6-211ENST00000606499 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
MSH6-211ENST00000606499 DDTLA6NHG4 134 aaPredicted RBP9.18□□□□□ -0.94
MSH6-211ENST00000606499 ENTPD3O75355 529 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 SLURP2P0DP57 97 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 TNNI2P48788 182 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 ATRNL1Q5VV63 1379 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 CTR9Q6PD62 1173 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 FAM83AQ86UY5 434 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 ZSCAN29Q8IWY8 852 aaPredicted RBP9.18□□□□□ -0.94
MSH6-211ENST00000606499 TEPSINQ96N21 525 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 TRPM7Q96QT4 1865 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 DSCC1Q9BVC3 393 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 GLIS2Q9BZE0 524 aaPredicted RBP9.18□□□□□ -0.94
MSH6-211ENST00000606499 NAPBQ9H115 298 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 DEFB129Q9H1M3 183 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 MCM9Q9NXL9 1143 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 PALD1Q9ULE6 856 aa9.18□□□□□ -0.94
MSH6-211ENST00000606499 ZMYM6O95789 1325 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 FAM196BA6NMK8 535 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 USP17L21D6R901 530 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 TRAF5O00463 557 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 REC8O95072 547 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 FGAP02671 866 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 PLCD1P51178 756 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 HAND2P61296 217 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 FMR1Q06787 632 aaKnown RBP eCLIP9.17□□□□□ -0.941e-9■■■■□ 23.4
MSH6-211ENST00000606499 GIMAP6Q6P9H5 292 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 MAP4K1Q92918 833 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 CSRNP1Q96S65 589 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 NACAP1Q9BZK3 213 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 ARPP21Q9UBL0 812 aaPredicted RBP9.17□□□□□ -0.94
MSH6-211ENST00000606499 RBM8AQ9Y5S9 174 aaKnown RBP9.17□□□□□ -0.94
MSH6-211ENST00000606499 TAF6LQ9Y6J9 622 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 DOCK1Q14185 1865 aa9.17□□□□□ -0.94
MSH6-211ENST00000606499 ROBO3Q96MS0 1386 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 MINDY4BA8MYZ0 360 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 POLR3DP05423 398 aaPredicted RBP9.16□□□□□ -0.94
MSH6-211ENST00000606499 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 ALX1Q15699 326 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 SBK1Q52WX2 424 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 NBPF12Q5TAG4 269 aaPredicted RBP9.16□□□□□ -0.94
MSH6-211ENST00000606499 C12orf60Q5U649 245 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
MSH6-211ENST00000606499 STK11IPQ8N1F8 1099 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms