RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 SRCIN1Q9C0H9 1055 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 IRF2BPLQ9H1B7 796 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 ABI2Q9NYB9 513 aaPredicted RBP5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 RAXQ9Y2V3 346 aa5.35□□□□□ -1.55
IGHV3-29-201ENST00000604817 KIAA0586Q9BVV6 1533 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 LOC102724428A0A0B4J2F2 783 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 KIAA1324LA8MWY0 1029 aaPredicted RBP5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 IGLV1-40P01703 118 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 SIK1P57059 783 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 ORC1Q13415 861 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 PLEKHG4Q58EX7 1191 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 TTC39BQ5VTQ0 682 aaPredicted RBP5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 NBPF6Q5VWK0 638 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 HFE2Q6ZVN8 426 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 IL22RA1Q8N6P7 574 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 STAG1Q8WVM7 1258 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 NBPF4Q96M43 638 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 ZFYVE28Q9HCC9 887 aa5.34□□□□□ -1.55
IGHV3-29-201ENST00000604817 ABCC2Q92887 1545 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 TEX14Q8IWB6 1497 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 CCDC194A0A1B0GVG4 234 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 DHX15O43143 795 aaKnown RBP5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 DNAJC6O75061 913 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 ALX3O95076 343 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 GLB1P16278 677 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 GRIK1P39086 918 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 GORABQ5T7V8 394 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 INTS5Q6P9B9 1019 aaKnown RBP5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 TICAM2Q86XR7 235 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 CKAP2LQ8IYA6 745 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 RASGRP4Q8TDF6 673 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 CEP41Q9BYV8 373 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 SPC25Q9HBM1 224 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 DDX56Q9NY93 547 aaKnown RBP5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 STOML1Q9UBI4 398 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 GGT7Q9UJ14 662 aa5.33□□□□□ -1.56
IGHV3-29-201ENST00000604817 A6NHS1 94 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 EDN3P14138 238 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 EIF4BP23588 611 aaKnown RBP5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 SETDB1Q15047 1291 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 UVSSAQ2YD98 709 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 GDF6Q6KF10 455 aaPredicted RBP5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 GALNT12Q8IXK2 581 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 CCDC74AQ96AQ1 378 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 GPRASP2Q96D09 838 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 TMEM63CQ9P1W3 806 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 MAGEC2Q9UBF1 373 aaPredicted RBP5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 RUSC2Q8N2Y8 1516 aa5.32□□□□□ -1.56
IGHV3-29-201ENST00000604817 DISP3Q9P2K9 1392 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 TNIKQ9UKE5 1360 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 J3QW42 95 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 PEX14O75381 377 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 GP2P55259 537 aaKnown RBP5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 AMPD3Q01432 767 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 ERMP1Q7Z2K6 904 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 OR13H1Q8NG92 308 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 SIRPGQ9P1W8 387 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 FOXD3Q9UJU5 478 aaPredicted RBP5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 USP20Q9Y2K6 914 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 EPRSP07814 1512 aaKnown RBP5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 UHRF1BP1LA0JNW5 1464 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 CARMIL2Q6F5E8 1435 aa5.31□□□□□ -1.56
IGHV3-29-201ENST00000604817 MAP3K4Q9Y6R4 1608 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 BIVM-ERCC5R4GMW8 1640 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 TAL1P17542 331 aaPredicted RBP5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 CES1P23141 567 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 MORC4Q8TE76 937 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 SEC16BQ96JE7 1060 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 NSUN5Q96P11 429 aaKnown RBP5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 OSBPL7Q9BZF2 842 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 CHRDQ9H2X0 955 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 C12orf49Q9H741 205 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 ZNF408Q9H9D4 720 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 FAM8A1Q9UBU6 413 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 G3BP2Q9UN86 482 aaKnown RBP5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 TRAK1Q9UPV9 953 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 UACAQ9BZF9 1416 aa5.3□□□□□ -1.56
IGHV3-29-201ENST00000604817 U2SURPO15042 1029 aaKnown RBP5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 KLF4O43474 513 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 MMP20O60882 483 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 TGFB1P01137 390 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 TAF1CQ15572 869 aaPredicted RBP5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 MEI1Q5TIA1 1274 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 ZDHHC13Q8IUH4 622 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 SMC5Q8IY18 1101 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 C1orf127Q8N9H9 656 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 SRPK1Q96SB4 655 aaKnown RBP5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 ZFYVE1Q9HBF4 777 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 NPHS2Q9NP85 383 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 COPRSQ9NQ92 184 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 PPP4R2Q9NY27 417 aa5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 OAS3Q9Y6K5 1087 aaKnown RBP5.29□□□□□ -1.56
IGHV3-29-201ENST00000604817 CUL7Q14999 1698 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 FAM221BA6H8Z2 402 aa5.28□□□□□ -1.56
IGHV3-29-201ENST00000604817 PPP1R12AO14974 1030 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms