RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CRHR2Q13324 411 aa22.2■■□□□ 1.14
CCDC12-208ENST00000603885 PICALMQ13492 652 aa22.2■■□□□ 1.14
CCDC12-208ENST00000603885 CHMP4BQ9H444 224 aaKnown RBP22.2■■□□□ 1.14
CCDC12-208ENST00000603885 EXOC6BQ9Y2D4 811 aa22.2■■□□□ 1.14
CCDC12-208ENST00000603885 IRF6O14896 467 aa22.19■■□□□ 1.14
CCDC12-208ENST00000603885 RHBDL3P58872 404 aa22.19■■□□□ 1.14
CCDC12-208ENST00000603885 PPATQ06203 517 aa22.19■■□□□ 1.14
CCDC12-208ENST00000603885 SNAPC2Q13487 334 aa22.19■■□□□ 1.14
CCDC12-208ENST00000603885 HSP90AB4PQ58FF6 505 aa22.19■■□□□ 1.14
CCDC12-208ENST00000603885 EAF2Q96CJ1 260 aaPredicted RBP22.19■■□□□ 1.14
CCDC12-208ENST00000603885 CCDC8Q9H0W5 538 aaPredicted RBP22.19■■□□□ 1.14
CCDC12-208ENST00000603885 DDX4Q9NQI0 724 aaKnown RBP22.19■■□□□ 1.14
CCDC12-208ENST00000603885 TLR7Q9NYK1 1049 aaKnown RBP22.19■■□□□ 1.14
CCDC12-208ENST00000603885 ATRNL1Q5VV63 1379 aa22.19■■□□□ 1.14
CCDC12-208ENST00000603885 NOL9Q5SY16 702 aaKnown RBP22.18■■□□□ 1.14
CCDC12-208ENST00000603885 SH3BP5LQ7L8J4 393 aa22.18■■□□□ 1.14
CCDC12-208ENST00000603885 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
CCDC12-208ENST00000603885 NOL10Q9BSC4 688 aaKnown RBP22.18■■□□□ 1.14
CCDC12-208ENST00000603885 ZBTB40Q9NUA8 1239 aa22.18■■□□□ 1.14
CCDC12-208ENST00000603885 MAST2Q6P0Q8 1798 aa22.17■■□□□ 1.14
CCDC12-208ENST00000603885 HMMRO75330 724 aa22.17■■□□□ 1.14
CCDC12-208ENST00000603885 NPM3O75607 178 aaKnown RBP22.17■■□□□ 1.14
CCDC12-208ENST00000603885 CYP2E1P05181 493 aaPredicted RBP22.17■■□□□ 1.14
CCDC12-208ENST00000603885 TAF1CQ15572 869 aaPredicted RBP22.17■■□□□ 1.14
CCDC12-208ENST00000603885 NAA16Q6N069 864 aaPredicted RBP22.17■■□□□ 1.14
CCDC12-208ENST00000603885 DDTLA6NHG4 134 aaPredicted RBP22.16■■□□□ 1.14
CCDC12-208ENST00000603885 IGSF3O75054 1194 aa22.16■■□□□ 1.14
CCDC12-208ENST00000603885 ZAP70P43403 619 aa22.16■■□□□ 1.14
CCDC12-208ENST00000603885 AACSQ86V21 672 aa22.16■■□□□ 1.14
CCDC12-208ENST00000603885 FAM43AQ8N2R8 423 aa22.16■■□□□ 1.14
CCDC12-208ENST00000603885 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.16■■□□□ 1.14
CCDC12-208ENST00000603885 ERO1AQ96HE7 468 aa22.16■■□□□ 1.14
CCDC12-208ENST00000603885 ZFYVE28Q9HCC9 887 aa22.16■■□□□ 1.14
CCDC12-208ENST00000603885 FBXO46Q6PJ61 603 aaPredicted RBP22.15■■□□□ 1.14
CCDC12-208ENST00000603885 ZCCHC17Q9NP64 241 aaKnown RBP22.15■■□□□ 1.14
CCDC12-208ENST00000603885 HPS5Q9UPZ3 1129 aa22.15■■□□□ 1.14
CCDC12-208ENST00000603885 PHF20L1A8MW92 1017 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 BAG3O95817 575 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 SP3Q02447 781 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 MAP3K10Q02779 954 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 PDE3AQ14432 1141 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 TEX11Q8IYF3 940 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 RHPN1Q8TCX5 695 aa22.14■■□□□ 1.13
CCDC12-208ENST00000603885 COL2A1P02458 1487 aaPredicted RBP22.14■■□□□ 1.13
CCDC12-208ENST00000603885 BTBD19C9JJ37 291 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 PLCG2P16885 1265 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 SCYL3Q8IZE3 742 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 OSBPL5Q9H0X9 879 aaPredicted RBP22.13■■□□□ 1.13
CCDC12-208ENST00000603885 IL1RAPL2Q9NP60 686 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 PIH1D3Q9NQM4 214 aaKnown RBP22.13■■□□□ 1.13
CCDC12-208ENST00000603885 PICK1Q9NRD5 415 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 KCNH4Q9UQ05 1017 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 TRIM17Q9Y577 477 aa22.13■■□□□ 1.13
CCDC12-208ENST00000603885 RGS19P49795 217 aa22.12■■□□□ 1.13
CCDC12-208ENST00000603885 SIRT2Q8IXJ6 389 aa22.12■■□□□ 1.13
CCDC12-208ENST00000603885 CD99L2Q8TCZ2 262 aa22.12■■□□□ 1.13
CCDC12-208ENST00000603885 SH3RF3Q8TEJ3 882 aaPredicted RBP22.12■■□□□ 1.13
CCDC12-208ENST00000603885 KIF1BPQ96EK5 621 aa22.12■■□□□ 1.13
CCDC12-208ENST00000603885 AATFQ9NY61 560 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCDC12-208ENST00000603885 APBB1O00213 710 aa22.11■■□□□ 1.13
CCDC12-208ENST00000603885 TBC1D12O60347 775 aa22.11■■□□□ 1.13
CCDC12-208ENST00000603885 PPP4CP60510 307 aa22.11■■□□□ 1.13
CCDC12-208ENST00000603885 OTOP1Q7RTM1 612 aa22.11■■□□□ 1.13
CCDC12-208ENST00000603885 CLASRPQ8N2M8 674 aaKnown RBP22.11■■□□□ 1.13
CCDC12-208ENST00000603885 CXCL11O14625 94 aa22.1■■□□□ 1.13
CCDC12-208ENST00000603885 CTNND1O60716 968 aaKnown RBP22.1■■□□□ 1.13
CCDC12-208ENST00000603885 IDH1O75874 414 aaKnown RBP22.1■■□□□ 1.13
CCDC12-208ENST00000603885 C20orf194Q5TEA3 1177 aa22.1■■□□□ 1.13
CCDC12-208ENST00000603885 ADGRA1Q86SQ6 560 aa22.1■■□□□ 1.13
CCDC12-208ENST00000603885 MYO5AQ9Y4I1 1855 aaKnown RBP22.1■■□□□ 1.13
CCDC12-208ENST00000603885 TLR2O60603 784 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 RAB11FIP3O75154 756 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 SLURP2P0DP57 97 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 PTPRAP18433 802 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 MLLT1Q03111 559 aaPredicted RBP22.09■■□□□ 1.13
CCDC12-208ENST00000603885 ANKRD23Q86SG2 305 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 EFCC1Q9HA90 598 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.09■■□□□ 1.13
CCDC12-208ENST00000603885 ZHX2Q9Y6X8 837 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 DOCK1Q14185 1865 aa22.09■■□□□ 1.13
CCDC12-208ENST00000603885 CYP7A1P22680 504 aa22.08■■□□□ 1.13
CCDC12-208ENST00000603885 SOX10P56693 466 aa22.08■■□□□ 1.13
CCDC12-208ENST00000603885 ARHGEF6Q15052 776 aa22.08■■□□□ 1.13
CCDC12-208ENST00000603885 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
CCDC12-208ENST00000603885 FAM196BA6NMK8 535 aa22.07■■□□□ 1.12
CCDC12-208ENST00000603885 PDHXO00330 501 aa22.07■■□□□ 1.12
CCDC12-208ENST00000603885 IFIT2P09913 472 aaKnown RBP22.07■■□□□ 1.12
CCDC12-208ENST00000603885 MAP3K12Q12852 859 aa22.07■■□□□ 1.12
CCDC12-208ENST00000603885 TMED8Q6PL24 325 aaPredicted RBP22.07■■□□□ 1.12
CCDC12-208ENST00000603885 TGFBRAP1Q8WUH2 860 aa22.07■■□□□ 1.12
CCDC12-208ENST00000603885 DHX36Q9H2U1 1008 aaKnown RBP22.07■■□□□ 1.12
CCDC12-208ENST00000603885 HTTP42858 3142 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 MOGSQ13724 837 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 CERS3Q8IU89 383 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 MAPKAPK5Q8IW41 473 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 MAGEB6Q8N7X4 407 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 ANTXR1Q9H6X2 564 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 PI4KBQ9UBF8 816 aa22.06■■□□□ 1.12
CCDC12-208ENST00000603885 HERC5Q9UII4 1024 aaKnown RBP22.06■■□□□ 1.12
CCDC12-208ENST00000603885 AFG3L2Q9Y4W6 797 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms