RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 ZMYM1Q5SVZ6 1142 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 TGFBRAP1Q8WUH2 860 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 PUS7LQ9H0K6 701 aaKnown RBP16.72■□□□□ 0.27
RNF40-212ENST00000602784 OSBPL5Q9H0X9 879 aaPredicted RBP16.72■□□□□ 0.27
RNF40-212ENST00000602784 DHX36Q9H2U1 1008 aaKnown RBP16.72■□□□□ 0.27
RNF40-212ENST00000602784 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 FLT1P17948 1338 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 MBD4O95243 580 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 DCAF15Q66K64 600 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 ARMC9Q7Z3E5 817 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 CDAN1Q8IWY9 1227 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 LCORLQ8N3X6 602 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 OSBP2Q969R2 916 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 RILPL2Q969X0 211 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 AIDAQ96BJ3 306 aa16.71■□□□□ 0.27
RNF40-212ENST00000602784 ABT1Q9ULW3 272 aaKnown RBP16.71■□□□□ 0.27
RNF40-212ENST00000602784 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 RASSF10A6NK89 507 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 USP5P45974 858 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 MAP3K10Q02779 954 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 SH3BP5LQ7L8J4 393 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
RNF40-212ENST00000602784 CSRNP1Q96S65 589 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
RNF40-212ENST00000602784 ARMT1Q9H993 441 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 ATP8A2Q9NTI2 1148 aa16.7■□□□□ 0.26
RNF40-212ENST00000602784 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
RNF40-212ENST00000602784 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
RNF40-212ENST00000602784 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
RNF40-212ENST00000602784 HIP1O00291 1037 aa16.69■□□□□ 0.26
RNF40-212ENST00000602784 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
RNF40-212ENST00000602784 GSPT1P15170 499 aaKnown RBP16.69■□□□□ 0.26
RNF40-212ENST00000602784 IREB2P48200 963 aaKnown RBP16.69■□□□□ 0.26
RNF40-212ENST00000602784 HUNKP57058 714 aa16.69■□□□□ 0.26
RNF40-212ENST00000602784 TTLL12Q14166 644 aaPredicted RBP16.69■□□□□ 0.26
RNF40-212ENST00000602784 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
RNF40-212ENST00000602784 MAPKAPK5Q8IW41 473 aa16.69■□□□□ 0.26
RNF40-212ENST00000602784 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
RNF40-212ENST00000602784 TBC1D12O60347 775 aa16.68■□□□□ 0.26
RNF40-212ENST00000602784 GNAT2P19087 354 aa16.68■□□□□ 0.26
RNF40-212ENST00000602784 SDSP20132 328 aa16.68■□□□□ 0.26
RNF40-212ENST00000602784 DEFB115Q30KQ5 88 aa16.68■□□□□ 0.26
RNF40-212ENST00000602784 PI4KBQ9UBF8 816 aa16.68■□□□□ 0.26
RNF40-212ENST00000602784 ANGEL1Q9UNK9 670 aaKnown RBP16.68■□□□□ 0.26
RNF40-212ENST00000602784 AK9Q5TCS8 1911 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 UBE2Q2LH0YL09 131 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 M0R2C6 588 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 GPAA1O43292 621 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 HTRA3P83110 453 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 GIMAP6Q6P9H5 292 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
RNF40-212ENST00000602784 FOXP4Q8IVH2 680 aaPredicted RBP16.67■□□□□ 0.26
RNF40-212ENST00000602784 DNAJC5GQ8N7S2 189 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 KLRG1Q96E93 195 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 DCP1AQ9NPI6 582 aaPredicted RBP16.67■□□□□ 0.26
RNF40-212ENST00000602784 HERC5Q9UII4 1024 aaKnown RBP16.67■□□□□ 0.26
RNF40-212ENST00000602784 ZNF112Q9UJU3 913 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
RNF40-212ENST00000602784 PRKG1Q13976 671 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 MCMDC2Q4G0Z9 681 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 SDR42E1Q8WUS8 393 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 SEC62Q99442 399 aaKnown RBP16.66■□□□□ 0.26
RNF40-212ENST00000602784 PALD1Q9ULE6 856 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
RNF40-212ENST00000602784 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 PRKAB2O43741 272 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 MAP3K9P80192 1104 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 RGMBQ6NW40 437 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 ANKRD13AQ8IZ07 590 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.65■□□□□ 0.268e-12■■□□□ 14.5
RNF40-212ENST00000602784 CCDC102AQ96A19 550 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 EHD4Q9H223 541 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 DIAPH3Q9NSV4 1193 aa16.65■□□□□ 0.26
RNF40-212ENST00000602784 A0A0D9SFI3 127 aa16.64■□□□□ 0.25
RNF40-212ENST00000602784 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
RNF40-212ENST00000602784 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
RNF40-212ENST00000602784 ECE1P42892 770 aa16.64■□□□□ 0.25
RNF40-212ENST00000602784 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
RNF40-212ENST00000602784 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.64■□□□□ 0.25
RNF40-212ENST00000602784 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
RNF40-212ENST00000602784 SAP30BPQ9UHR5 308 aaKnown RBP16.64■□□□□ 0.25
RNF40-212ENST00000602784 FZD1Q9UP38 647 aa16.64■□□□□ 0.25
RNF40-212ENST00000602784 MYH1P12882 1939 aa16.64■□□□□ 0.25
RNF40-212ENST00000602784 POLR3DP05423 398 aaPredicted RBP16.63■□□□□ 0.25
RNF40-212ENST00000602784 ZNF157P51786 506 aaPredicted RBP16.63■□□□□ 0.25
RNF40-212ENST00000602784 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
RNF40-212ENST00000602784 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
RNF40-212ENST00000602784 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
RNF40-212ENST00000602784 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
RNF40-212ENST00000602784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms