RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 BRF1Q92994 677 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 HSP90B2PQ58FF3 399 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 TDRD7Q8NHU6 1098 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 HAUS7Q99871 368 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 KDM3BQ7LBC6 1761 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 NR1I2O75469 434 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 ERCC4Q92889 916 aaPredicted RBP17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 RIPOR2Q9Y4F9 1068 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 SASH3O75995 380 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 DDX19AQ9NUU7 478 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 MINDY4BA8MYZ0 360 aa17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 PIH1D3Q9NQM4 214 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-206ENST00000602655 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 EXOC4Q96A65 974 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 SCN11AQ9UI33 1791 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 CYP21A2P08686 494 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 TPTE2Q6XPS3 522 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 PPP1R13BQ96KQ4 1090 aa17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 RPAP1Q9BWH6 1393 aaPredicted RBP17.61■□□□□ 0.41
PPFIA3-206ENST00000602655 RIMBP2O15034 1052 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 ZKSCAN3Q9BRR0 538 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 ARMT1Q9H993 441 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 PRKAB2O43741 272 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 PPP2R5AQ15172 486 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 AIDAQ96BJ3 306 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 SLC5A1P13866 664 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 MCTP2Q6DN12 878 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
PPFIA3-206ENST00000602655 RNF113AO15541 343 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 ZRANB2O95218 330 aaKnown RBP eCLIP17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 NTSR2O95665 410 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 CCZ1BP86790 482 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 DHX8Q14562 1220 aaKnown RBP17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 PDE11AQ9HCR9 933 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 ELP1O95163 1332 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 TBC1D8O95759 1140 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 CSF1RP07333 972 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 TPM1P09493 284 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 AOPEPQ8N6M6 819 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 SMIM22K7EJ46 135 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 CC2D1AQ6P1N0 951 aaPredicted RBP17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 Q6ZUG5 572 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 REXO1L1PQ8IX06 675 aa17.59■□□□□ 0.41
PPFIA3-206ENST00000602655 ZNF532Q9HCE3 1301 aa17.58■□□□□ 0.41
PPFIA3-206ENST00000602655 TRIM28Q13263 835 aaKnown RBP17.58■□□□□ 0.41
PPFIA3-206ENST00000602655 NFIXQ14938 502 aa17.58■□□□□ 0.41
PPFIA3-206ENST00000602655 MRC1P22897 1456 aa17.58■□□□□ 0.4
PPFIA3-206ENST00000602655 MAST3O60307 1309 aa17.58■□□□□ 0.4
PPFIA3-206ENST00000602655 HIP1O00291 1037 aa17.58■□□□□ 0.4
PPFIA3-206ENST00000602655 C11orf57Q6ZUT1 292 aaPredicted RBP17.58■□□□□ 0.4
PPFIA3-206ENST00000602655 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
PPFIA3-206ENST00000602655 GPAA1O43292 621 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 PRDM1O75626 825 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 LIG3P49916 1009 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 GSDMDP57764 484 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 ME3Q16798 604 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 NEK1Q96PY6 1258 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 CDC5LQ99459 802 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 TPCN1Q9ULQ1 816 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 LRP6O75581 1613 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 ETF1P62495 437 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 SETQ01105 290 aaPredicted RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 CDC37L1Q7L3B6 337 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 SRRTQ9BXP5 876 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 RABEP2Q9H5N1 569 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 JAK2O60674 1132 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 RPS6KA4O75676 772 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 PUM3Q15397 648 aaKnown RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 E4F1Q66K89 784 aaPredicted RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 TXNRD3Q86VQ6 643 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 GIMAP7Q8NHV1 300 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 SCAND2PQ9GZW5 306 aaPredicted RBP17.57■□□□□ 0.4
PPFIA3-206ENST00000602655 AOX1Q06278 1338 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 RPS8P62241 208 aaKnown RBP17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 MMS22LQ6ZRQ5 1243 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 CLSTN2Q9H4D0 955 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 H0YHG0 523 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 GNG11P61952 73 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 MYL10Q9BUA6 226 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 MBD4O95243 580 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms