RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PLIN2Q99541 437 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.85
CSMD1-216ENST00000602557 PLCB3Q01970 1234 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 IGSF22Q8N9C0 903 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 FAM212AQ96EL1 285 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 MTRF1LQ9UGC7 380 aaKnown RBP9.71□□□□□ -0.85
CSMD1-216ENST00000602557 TUBBP07437 444 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 KRT2P35908 639 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 SUFUQ9UMX1 484 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 ST5P78524 1137 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 SLC9C2Q5TAH2 1124 aa9.71□□□□□ -0.85
CSMD1-216ENST00000602557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.71□□□□□ -0.85
CSMD1-216ENST00000602557 PICALMQ13492 652 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 MPHOSPH6Q99547 160 aaKnown RBP9.71□□□□□ -0.86
CSMD1-216ENST00000602557 PYCARDQ9ULZ3 195 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 CFAP43Q8NDM7 1665 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-216ENST00000602557 GRM8O00222 908 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 RAB3IPQ96QF0 476 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-216ENST00000602557 PPIP5K1Q6PFW1 1433 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 ATP2A1O14983 1001 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 FAM13AO94988 1023 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
CSMD1-216ENST00000602557 KDM5BQ9UGL1 1544 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 TSGA10Q9BZW7 698 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 MSH6P52701 1360 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 EXOC5O00471 708 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 UQCRFS1P1P0C7P4 283 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 NAA16Q6N069 864 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-216ENST00000602557 EFCAB13Q8IY85 973 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 IFNL2Q8IZJ0 200 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 BICDL2A1A5D9 508 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 KLHL7Q8IXQ5 586 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 LMBR1Q8WVP7 490 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 IMPG2Q9BZV3 1241 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 CREB3O43889 395 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 HNRNPH2P55795 449 aaKnown RBP9.7□□□□□ -0.86
CSMD1-216ENST00000602557 CHRNA2Q15822 529 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 DTNBO60941 627 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 IFT20Q8IY31 132 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 MAGEB6Q8N7X4 407 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 PA2G4Q9UQ80 394 aaKnown RBP9.7□□□□□ -0.86
CSMD1-216ENST00000602557 GPR161Q8N6U8 529 aaKnown RBP9.7□□□□□ -0.86
CSMD1-216ENST00000602557 SMARCC2Q8TAQ2 1214 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 DESI2Q9BSY9 194 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 HMGB2P26583 209 aaKnown RBP9.7□□□□□ -0.86
CSMD1-216ENST00000602557 RFC4P35249 363 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 CCDC110Q8TBZ0 833 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 C6orf50Q9HD87 102 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 TEX13AQ9BXU3 409 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-216ENST00000602557 FAM204AQ9H8W3 233 aa9.7□□□□□ -0.86
CSMD1-216ENST00000602557 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 LMBRD1Q9NUN5 540 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ANKRD65E5RJM6 399 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 FAM170AA1A519 330 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 EIF4E1BA6NMX2 242 aaKnown RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 RXRAP19793 462 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 FANCCQ00597 558 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 DCAF17Q5H9S7 520 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 TMTC2Q8N394 836 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 AK2P54819 239 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 MMS22LQ6ZRQ5 1243 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 FANCAO15360 1455 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ANKRD44Q8N8A2 993 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ANKRD42Q8N9B4 389 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 JAG2Q9Y219 1238 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 BCAS4Q8TDM0 211 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 TSC22D3Q99576 134 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 SLC39A6Q13433 755 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 CCDC92Q53HC0 331 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 ABCA10Q8WWZ4 1543 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 MAGEB6P1A0A0J9YX57 407 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 MTX1Q13505 466 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 KRT71Q3SY84 523 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 CREB3L3Q68CJ9 461 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 BRD3Q15059 726 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 JAKMIP2Q96AA8 810 aa9.69□□□□□ -0.86
CSMD1-216ENST00000602557 RRP36Q96EU6 259 aaKnown RBP9.69□□□□□ -0.86
CSMD1-216ENST00000602557 CNGA4Q8IV77 575 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 G3BP2Q9UN86 482 aaKnown RBP9.68□□□□□ -0.86
CSMD1-216ENST00000602557 CALML3P27482 149 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 ZKSCAN8Q15776 578 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-216ENST00000602557 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 TEX2Q8IWB9 1127 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 FRMD4BQ9Y2L6 1034 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 FAN1Q9Y2M0 1017 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 GYS2P54840 703 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 ZNF804AQ7Z570 1209 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 TCP11Q8WWU5 503 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 PPP1R9AQ9ULJ8 1098 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 ABCC1P33527 1531 aa9.68□□□□□ -0.86
CSMD1-216ENST00000602557 RASSF2P50749 326 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms