RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 ABCF2Q9UG63 623 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 SRRDQ9UH36 339 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 PA2G4Q9UQ80 394 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 SLC45A1Q9Y2W3 748 aa22.04■■□□□ 1.12
SHKBP1-227ENST00000602011 TRIOBPQ9H2D6 2365 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 A0A1B0GUL7 405 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 PHF20L1A8MW92 1017 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 CTNND1O60716 968 aaKnown RBP22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 PSMC4P43686 418 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 RGS3P49796 1198 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 GSTO1P78417 241 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 RASGRF1Q13972 1273 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 ERICH6Q7L0X2 663 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 NKX2-3Q8TAU0 364 aa22.03■■□□□ 1.12
SHKBP1-227ENST00000602011 TBC1D12O60347 775 aa22.02■■□□□ 1.12
SHKBP1-227ENST00000602011 IGSF3O75054 1194 aa22.02■■□□□ 1.12
SHKBP1-227ENST00000602011 ZSCAN29Q8IWY8 852 aaPredicted RBP22.02■■□□□ 1.12
SHKBP1-227ENST00000602011 SHISA4Q96DD7 197 aa22.02■■□□□ 1.12
SHKBP1-227ENST00000602011 XAGE2Q96GT9 111 aa22.02■■□□□ 1.12
SHKBP1-227ENST00000602011 TRIM47Q96LD4 638 aa22.02■■□□□ 1.12
SHKBP1-227ENST00000602011 GPR75-ASB3A0A0A6YYF3 556 aa22.01■■□□□ 1.11
SHKBP1-227ENST00000602011 FMNL1O95466 1100 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-227ENST00000602011 ADORA1P30542 326 aa22.01■■□□□ 1.11
SHKBP1-227ENST00000602011 MOGSQ13724 837 aa22.01■■□□□ 1.11
SHKBP1-227ENST00000602011 ZHX2Q9Y6X8 837 aa22.01■■□□□ 1.11
SHKBP1-227ENST00000602011 A0A0G2JLL6 359 aaPredicted RBP22■■□□□ 1.11
SHKBP1-227ENST00000602011 GNAI2P04899 355 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 PTPRAP18433 802 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 OSBPP22059 807 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 GORABQ5T7V8 394 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 PRRT2Q7Z6L0 340 aaPredicted RBP22■■□□□ 1.11
SHKBP1-227ENST00000602011 ZFPM1Q8IX07 1006 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 RAET1EQ8TD07 263 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 TBC1D2Q9BYX2 928 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 ADGRA2Q96PE1 1338 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 AK9Q5TCS8 1911 aa22■■□□□ 1.11
SHKBP1-227ENST00000602011 BTDP43251 543 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 FCGRTP55899 365 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 TFCP2Q12800 502 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 G3BP1Q13283 466 aaKnown RBP eCLIP21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 GPAT2Q6NUI2 795 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 NEUROD6Q96NK8 337 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 AFG3L2Q9Y4W6 797 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 MROH7-TTC4A0A0A0MT08 1334 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 ATRNL1Q5VV63 1379 aa21.99■■□□□ 1.11
SHKBP1-227ENST00000602011 MYH13Q9UKX3 1938 aa21.98■■□□□ 1.11
SHKBP1-227ENST00000602011 BCRP11274 1271 aa21.98■■□□□ 1.11
SHKBP1-227ENST00000602011 GRK4P32298 578 aa21.98■■□□□ 1.11
SHKBP1-227ENST00000602011 UQCRFS1P1P0C7P4 283 aa21.97■■□□□ 1.11
SHKBP1-227ENST00000602011 SLURP2P0DP57 97 aa21.97■■□□□ 1.11
SHKBP1-227ENST00000602011 UBXN2AP68543 259 aa21.97■■□□□ 1.11
SHKBP1-227ENST00000602011 MECOMQ03112 1051 aa21.97■■□□□ 1.11
SHKBP1-227ENST00000602011 ATF7IPQ6VMQ6 1270 aa21.97■■□□□ 1.11
SHKBP1-227ENST00000602011 CHRDL2Q6WN34 429 aa21.97■■□□□ 1.11
SHKBP1-227ENST00000602011 CYP2C8P10632 490 aa21.96■■□□□ 1.11
SHKBP1-227ENST00000602011 SH3BP5LQ7L8J4 393 aa21.96■■□□□ 1.11
SHKBP1-227ENST00000602011 SPATA5Q8NB90 893 aa21.96■■□□□ 1.11
SHKBP1-227ENST00000602011 OSBPL5Q9H0X9 879 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-227ENST00000602011 MYPNQ86TC9 1320 aa21.96■■□□□ 1.11
SHKBP1-227ENST00000602011 RFX7Q2KHR2 1363 aa21.96■■□□□ 1.11
SHKBP1-227ENST00000602011 DDTLA6NHG4 134 aaPredicted RBP21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 SLAIN1Q8ND83 568 aa21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 DPF3Q92784 378 aa21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 GPR108Q9NPR9 543 aa21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 HMG20BQ9P0W2 317 aa21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 PNMA3Q9UL41 463 aa21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 SZT2Q5T011 3432 aa21.95■■□□□ 1.1
SHKBP1-227ENST00000602011 GJB1P08034 283 aa21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 CCL5P13501 91 aa21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 ARID4AP29374 1257 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 RHBDL3P58872 404 aa21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 PRKCZQ05513 592 aa21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 NSUN4Q96CB9 384 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 NOL10Q9BSC4 688 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-227ENST00000602011 TRIM27P14373 513 aa21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 PABPC4Q13310 644 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 PICALMQ13492 652 aa21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 DDX4Q9NQI0 724 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 BIN2Q9UBW5 565 aaPredicted RBP21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 GABRQQ9UN88 632 aa21.93■■□□□ 1.1
SHKBP1-227ENST00000602011 BAG3O95817 575 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 PLCG2P16885 1265 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 GJA8P48165 433 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 GADL1Q6ZQY3 521 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 PROCA1Q8NCQ7 364 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 PXYLP1Q8TE99 480 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 SMCR8Q8TEV9 937 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 DHX36Q9H2U1 1008 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 RAI14Q9P0K7 980 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 LRP2BPQ9P2M1 347 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 RBM27Q9P2N5 1060 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 HERC5Q9UII4 1024 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 AGTPBP1Q9UPW5 1226 aa21.92■■□□□ 1.1
SHKBP1-227ENST00000602011 IRF5Q13568 498 aa21.91■■□□□ 1.1
SHKBP1-227ENST00000602011 CCDC158Q5M9N0 1113 aa21.91■■□□□ 1.1
SHKBP1-227ENST00000602011 RNF208Q9H0X6 261 aa21.91■■□□□ 1.1
SHKBP1-227ENST00000602011 RANBP2P49792 3224 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-227ENST00000602011 COL2A1P02458 1487 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms