RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 CCDC8Q9H0W5 538 aaPredicted RBP31.94■■■□□ 2.7
PNKP-216ENST00000601816 RHBDL3P58872 404 aa31.93■■■□□ 2.7
PNKP-216ENST00000601816 EAF2Q96CJ1 260 aaPredicted RBP31.93■■■□□ 2.7
PNKP-216ENST00000601816 DDX4Q9NQI0 724 aaKnown RBP31.93■■■□□ 2.7
PNKP-216ENST00000601816 TLR7Q9NYK1 1049 aaKnown RBP31.93■■■□□ 2.7
PNKP-216ENST00000601816 HSP90AB4PQ58FF6 505 aa31.92■■■□□ 2.7
PNKP-216ENST00000601816 CHMP4BQ9H444 224 aaKnown RBP31.92■■■□□ 2.7
PNKP-216ENST00000601816 ATRNL1Q5VV63 1379 aa31.92■■■□□ 2.7
PNKP-216ENST00000601816 DOCK2Q92608 1830 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 IRF6O14896 467 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 MAP4K4O95819 1239 aaPredicted RBP31.91■■■□□ 2.7
PNKP-216ENST00000601816 CETPP11597 493 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 PPATQ06203 517 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 SNAPC2Q13487 334 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 SH3BP5LQ7L8J4 393 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 ZBTB40Q9NUA8 1239 aa31.91■■■□□ 2.7
PNKP-216ENST00000601816 NOL9Q5SY16 702 aaKnown RBP31.9■■■□□ 2.7
PNKP-216ENST00000601816 RPAP2Q8IXW5 612 aaPredicted RBP31.9■■■□□ 2.7
PNKP-216ENST00000601816 HMMRO75330 724 aa31.89■■■□□ 2.7
PNKP-216ENST00000601816 CYP2E1P05181 493 aaPredicted RBP31.89■■■□□ 2.7
PNKP-216ENST00000601816 ZAP70P43403 619 aa31.89■■■□□ 2.7
PNKP-216ENST00000601816 NAA16Q6N069 864 aaPredicted RBP31.89■■■□□ 2.7
PNKP-216ENST00000601816 NOL10Q9BSC4 688 aaKnown RBP31.89■■■□□ 2.7
PNKP-216ENST00000601816 DDTLA6NHG4 134 aaPredicted RBP31.88■■■□□ 2.69
PNKP-216ENST00000601816 NPM3O75607 178 aaKnown RBP31.88■■■□□ 2.69
PNKP-216ENST00000601816 TAF1CQ15572 869 aaPredicted RBP31.88■■■□□ 2.69
PNKP-216ENST00000601816 AACSQ86V21 672 aa31.88■■■□□ 2.69
PNKP-216ENST00000601816 FAM43AQ8N2R8 423 aa31.88■■■□□ 2.69
PNKP-216ENST00000601816 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.88■■■□□ 2.69
PNKP-216ENST00000601816 MAST2Q6P0Q8 1798 aa31.88■■■□□ 2.69
PNKP-216ENST00000601816 ZFYVE28Q9HCC9 887 aa31.87■■■□□ 2.69
PNKP-216ENST00000601816 ERO1AQ96HE7 468 aa31.86■■■□□ 2.69
PNKP-216ENST00000601816 HPS5Q9UPZ3 1129 aa31.86■■■□□ 2.69
PNKP-216ENST00000601816 PHF20L1A8MW92 1017 aa31.85■■■□□ 2.69
PNKP-216ENST00000601816 IGSF3O75054 1194 aa31.85■■■□□ 2.69
PNKP-216ENST00000601816 PDE3AQ14432 1141 aa31.85■■■□□ 2.69
PNKP-216ENST00000601816 FBXO46Q6PJ61 603 aaPredicted RBP31.85■■■□□ 2.69
PNKP-216ENST00000601816 TEX11Q8IYF3 940 aa31.85■■■□□ 2.69
PNKP-216ENST00000601816 RHPN1Q8TCX5 695 aa31.85■■■□□ 2.69
PNKP-216ENST00000601816 IL1RAPL2Q9NP60 686 aa31.85■■■□□ 2.69
PNKP-216ENST00000601816 ZCCHC17Q9NP64 241 aaKnown RBP31.85■■■□□ 2.69
PNKP-216ENST00000601816 PIH1D3Q9NQM4 214 aaKnown RBP31.85■■■□□ 2.69
PNKP-216ENST00000601816 BAG3O95817 575 aa31.84■■■□□ 2.69
PNKP-216ENST00000601816 MAP3K10Q02779 954 aa31.84■■■□□ 2.69
PNKP-216ENST00000601816 BTBD19C9JJ37 291 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 SP3Q02447 781 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 SIRT2Q8IXJ6 389 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 SCYL3Q8IZE3 742 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 SH3RF3Q8TEJ3 882 aaPredicted RBP31.83■■■□□ 2.69
PNKP-216ENST00000601816 PICK1Q9NRD5 415 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 AATFQ9NY61 560 aaKnown RBP eCLIP31.83■■■□□ 2.69
PNKP-216ENST00000601816 KCNH4Q9UQ05 1017 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 TRIM17Q9Y577 477 aa31.83■■■□□ 2.69
PNKP-216ENST00000601816 COL2A1P02458 1487 aaPredicted RBP31.83■■■□□ 2.69
PNKP-216ENST00000601816 PLCG2P16885 1265 aa31.82■■■□□ 2.68
PNKP-216ENST00000601816 C20orf194Q5TEA3 1177 aa31.82■■■□□ 2.68
PNKP-216ENST00000601816 CD99L2Q8TCZ2 262 aa31.82■■■□□ 2.68
PNKP-216ENST00000601816 KIF1BPQ96EK5 621 aa31.82■■■□□ 2.68
PNKP-216ENST00000601816 OSBPL5Q9H0X9 879 aaPredicted RBP31.82■■■□□ 2.68
PNKP-216ENST00000601816 APBB1O00213 710 aa31.81■■■□□ 2.68
PNKP-216ENST00000601816 SLURP2P0DP57 97 aa31.8■■■□□ 2.68
PNKP-216ENST00000601816 RGS19P49795 217 aa31.8■■■□□ 2.68
PNKP-216ENST00000601816 OTOP1Q7RTM1 612 aa31.8■■■□□ 2.68
PNKP-216ENST00000601816 CLASRPQ8N2M8 674 aaKnown RBP31.8■■■□□ 2.68
PNKP-216ENST00000601816 TBC1D12O60347 775 aa31.79■■■□□ 2.68
PNKP-216ENST00000601816 IDH1O75874 414 aaKnown RBP31.79■■■□□ 2.68
PNKP-216ENST00000601816 PPP4CP60510 307 aa31.79■■■□□ 2.68
PNKP-216ENST00000601816 ADGRA1Q86SQ6 560 aa31.79■■■□□ 2.68
PNKP-216ENST00000601816 CTNND1O60716 968 aaKnown RBP31.78■■■□□ 2.68
PNKP-216ENST00000601816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.78■■■□□ 2.68
PNKP-216ENST00000601816 CXCL11O14625 94 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 RAB11FIP3O75154 756 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 PTPRAP18433 802 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 CYP7A1P22680 504 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 ANKRD23Q86SG2 305 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 NDUFB9Q9Y6M9 179 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 ZHX2Q9Y6X8 837 aa31.77■■■□□ 2.68
PNKP-216ENST00000601816 FAM196BA6NMK8 535 aa31.76■■■□□ 2.67
PNKP-216ENST00000601816 TLR2O60603 784 aa31.76■■■□□ 2.67
PNKP-216ENST00000601816 SOX10P56693 466 aa31.76■■■□□ 2.67
PNKP-216ENST00000601816 EFCC1Q9HA90 598 aa31.76■■■□□ 2.67
PNKP-216ENST00000601816 MYO5AQ9Y4I1 1855 aaKnown RBP31.76■■■□□ 2.67
PNKP-216ENST00000601816 IFIT2P09913 472 aaKnown RBP31.75■■■□□ 2.67
PNKP-216ENST00000601816 MLLT1Q03111 559 aaPredicted RBP31.75■■■□□ 2.67
PNKP-216ENST00000601816 TGFBRAP1Q8WUH2 860 aa31.75■■■□□ 2.67
PNKP-216ENST00000601816 DOCK1Q14185 1865 aa31.75■■■□□ 2.67
PNKP-216ENST00000601816 PDHXO00330 501 aa31.74■■■□□ 2.67
PNKP-216ENST00000601816 MAP3K12Q12852 859 aa31.74■■■□□ 2.67
PNKP-216ENST00000601816 MOGSQ13724 837 aa31.74■■■□□ 2.67
PNKP-216ENST00000601816 DHX36Q9H2U1 1008 aaKnown RBP31.74■■■□□ 2.67
PNKP-216ENST00000601816 ANTXR1Q9H6X2 564 aa31.74■■■□□ 2.67
PNKP-216ENST00000601816 ARHGEF6Q15052 776 aa31.73■■■□□ 2.67
PNKP-216ENST00000601816 MAPKAPK5Q8IW41 473 aa31.73■■■□□ 2.67
PNKP-216ENST00000601816 MAGEB6Q8N7X4 407 aa31.73■■■□□ 2.67
PNKP-216ENST00000601816 BCL11AQ9H165 835 aa31.73■■■□□ 2.67
PNKP-216ENST00000601816 FLT1P17948 1338 aa31.73■■■□□ 2.67
PNKP-216ENST00000601816 PI4KBQ9UBF8 816 aa31.72■■■□□ 2.67
PNKP-216ENST00000601816 HERC5Q9UII4 1024 aaKnown RBP31.72■■■□□ 2.67
PNKP-216ENST00000601816 AFG3L2Q9Y4W6 797 aa31.72■■■□□ 2.67
PNKP-216ENST00000601816 DYNLL1P63167 89 aaKnown RBP31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms