RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 FAM43AQ8N2R8 423 aa27.83■■■□□ 2.05
SSBP4-209ENST00000601357 DBNLQ9UJU6 430 aaKnown RBP27.83■■■□□ 2.05
SSBP4-209ENST00000601357 NPM3O75607 178 aaKnown RBP27.82■■■□□ 2.04
SSBP4-209ENST00000601357 CETPP11597 493 aa27.82■■■□□ 2.04
SSBP4-209ENST00000601357 SNAPC2Q13487 334 aa27.82■■■□□ 2.04
SSBP4-209ENST00000601357 TTC39AQ5SRH9 613 aa27.82■■■□□ 2.04
SSBP4-209ENST00000601357 RAI14Q9P0K7 980 aa27.82■■■□□ 2.04
SSBP4-209ENST00000601357 DDTLA6NHG4 134 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-209ENST00000601357 PHF20L1A8MW92 1017 aa27.81■■■□□ 2.04
SSBP4-209ENST00000601357 MAP4K4O95819 1239 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-209ENST00000601357 LDHCP07864 332 aa27.81■■■□□ 2.04
SSBP4-209ENST00000601357 FBXO46Q6PJ61 603 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-209ENST00000601357 EAF2Q96CJ1 260 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-209ENST00000601357 ZCCHC17Q9NP64 241 aaKnown RBP27.81■■■□□ 2.04
SSBP4-209ENST00000601357 SNRKQ9NRH2 765 aa27.81■■■□□ 2.04
SSBP4-209ENST00000601357 TLR7Q9NYK1 1049 aaKnown RBP27.81■■■□□ 2.04
SSBP4-209ENST00000601357 LRP2BPQ9P2M1 347 aa27.8■■■□□ 2.04
SSBP4-209ENST00000601357 RCAN3Q9UKA8 241 aa27.8■■■□□ 2.04
SSBP4-209ENST00000601357 MYO5AQ9Y4I1 1855 aaKnown RBP27.8■■■□□ 2.04
SSBP4-209ENST00000601357 COL2A1P02458 1487 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-209ENST00000601357 CYP2E1P05181 493 aaPredicted RBP27.79■■■□□ 2.04
SSBP4-209ENST00000601357 PICALMQ13492 652 aa27.79■■■□□ 2.04
SSBP4-209ENST00000601357 KCNH4Q9UQ05 1017 aa27.79■■■□□ 2.04
SSBP4-209ENST00000601357 BTBD19C9JJ37 291 aa27.78■■■□□ 2.04
SSBP4-209ENST00000601357 TAF1CQ15572 869 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-209ENST00000601357 OTOP1Q7RTM1 612 aa27.78■■■□□ 2.04
SSBP4-209ENST00000601357 ZSCAN29Q8IWY8 852 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-209ENST00000601357 ERO1AQ96HE7 468 aa27.78■■■□□ 2.04
SSBP4-209ENST00000601357 ZBTB40Q9NUA8 1239 aa27.78■■■□□ 2.04
SSBP4-209ENST00000601357 DDX19BQ9UMR2 479 aa27.78■■■□□ 2.04
SSBP4-209ENST00000601357 EXOC6BQ9Y2D4 811 aa27.78■■■□□ 2.04
SSBP4-209ENST00000601357 SP3Q02447 781 aa27.77■■■□□ 2.04
SSBP4-209ENST00000601357 ERC1Q8IUD2 1116 aa27.77■■■□□ 2.04
SSBP4-209ENST00000601357 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-209ENST00000601357 CCDC8Q9H0W5 538 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-209ENST00000601357 ZFYVE28Q9HCC9 887 aa27.77■■■□□ 2.04
SSBP4-209ENST00000601357 COG6Q9Y2V7 657 aa27.77■■■□□ 2.04
SSBP4-209ENST00000601357 DOCK1Q14185 1865 aa27.76■■■□□ 2.04
SSBP4-209ENST00000601357 IGSF3O75054 1194 aa27.76■■■□□ 2.03
SSBP4-209ENST00000601357 ZAP70P43403 619 aa27.76■■■□□ 2.03
SSBP4-209ENST00000601357 CAP1Q01518 475 aa27.76■■■□□ 2.03
SSBP4-209ENST00000601357 CD99L2Q8TCZ2 262 aa27.76■■■□□ 2.03
SSBP4-209ENST00000601357 TRIM17Q9Y577 477 aa27.76■■■□□ 2.03
SSBP4-209ENST00000601357 CENPFP49454 3210 aa27.75■■■□□ 2.03
SSBP4-209ENST00000601357 CDK5RAP2Q96SN8 1893 aa27.75■■■□□ 2.03
SSBP4-209ENST00000601357 SLURP2P0DP57 97 aa27.75■■■□□ 2.03
SSBP4-209ENST00000601357 MLLT1Q03111 559 aaPredicted RBP27.75■■■□□ 2.03
SSBP4-209ENST00000601357 MOGSQ13724 837 aa27.75■■■□□ 2.03
SSBP4-209ENST00000601357 RPAP2Q8IXW5 612 aaPredicted RBP27.75■■■□□ 2.03
SSBP4-209ENST00000601357 SCYL3Q8IZE3 742 aa27.75■■■□□ 2.03
SSBP4-209ENST00000601357 FOCADQ5VW36 1801 aa27.74■■■□□ 2.03
SSBP4-209ENST00000601357 PHIPQ8WWQ0 1821 aa27.74■■■□□ 2.03
SSBP4-209ENST00000601357 TNRC18O15417 2968 aaPredicted RBP27.74■■■□□ 2.03
SSBP4-209ENST00000601357 TBC1D12O60347 775 aa27.74■■■□□ 2.03
SSBP4-209ENST00000601357 NAA16Q6N069 864 aaPredicted RBP27.74■■■□□ 2.03
SSBP4-209ENST00000601357 SIRT2Q8IXJ6 389 aa27.74■■■□□ 2.03
SSBP4-209ENST00000601357 PIH1D3Q9NQM4 214 aaKnown RBP27.74■■■□□ 2.03
SSBP4-209ENST00000601357 TLR2O60603 784 aa27.73■■■□□ 2.03
SSBP4-209ENST00000601357 SOX10P56693 466 aa27.73■■■□□ 2.03
SSBP4-209ENST00000601357 HSP90AB4PQ58FF6 505 aa27.73■■■□□ 2.03
SSBP4-209ENST00000601357 ADGRA1Q86SQ6 560 aa27.73■■■□□ 2.03
SSBP4-209ENST00000601357 SH3RF3Q8TEJ3 882 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-209ENST00000601357 OSBPL5Q9H0X9 879 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-209ENST00000601357 PTPRAP18433 802 aa27.72■■■□□ 2.03
SSBP4-209ENST00000601357 PPP4CP60510 307 aa27.72■■■□□ 2.03
SSBP4-209ENST00000601357 ANKRD23Q86SG2 305 aa27.72■■■□□ 2.03
SSBP4-209ENST00000601357 TEX11Q8IYF3 940 aa27.72■■■□□ 2.03
SSBP4-209ENST00000601357 CTNND1O60716 968 aaKnown RBP27.71■■■□□ 2.03
SSBP4-209ENST00000601357 RHPN1Q8TCX5 695 aa27.71■■■□□ 2.03
SSBP4-209ENST00000601357 PTPN22Q9Y2R2 807 aa27.71■■■□□ 2.03
SSBP4-209ENST00000601357 SIPA1L1O43166 1804 aa27.71■■■□□ 2.03
SSBP4-209ENST00000601357 PTPRFP10586 1907 aa27.71■■■□□ 2.03
SSBP4-209ENST00000601357 CXCL11O14625 94 aa27.7■■■□□ 2.02
SSBP4-209ENST00000601357 BAG3O95817 575 aa27.7■■■□□ 2.02
SSBP4-209ENST00000601357 AACSQ86V21 672 aa27.7■■■□□ 2.02
SSBP4-209ENST00000601357 EFCC1Q9HA90 598 aa27.7■■■□□ 2.02
SSBP4-209ENST00000601357 PICK1Q9NRD5 415 aa27.7■■■□□ 2.02
SSBP4-209ENST00000601357 AATFQ9NY61 560 aaKnown RBP eCLIP27.7■■■□□ 2.02
SSBP4-209ENST00000601357 NOL10Q9BSC4 688 aaKnown RBP27.69■■■□□ 2.02
SSBP4-209ENST00000601357 IL1RAPL2Q9NP60 686 aa27.69■■■□□ 2.02
SSBP4-209ENST00000601357 AFG3L2Q9Y4W6 797 aa27.69■■■□□ 2.02
SSBP4-209ENST00000601357 ZHX2Q9Y6X8 837 aa27.69■■■□□ 2.02
SSBP4-209ENST00000601357 PDHXO00330 501 aa27.68■■■□□ 2.02
SSBP4-209ENST00000601357 HMMRO75330 724 aa27.68■■■□□ 2.02
SSBP4-209ENST00000601357 PLCG2P16885 1265 aa27.68■■■□□ 2.02
SSBP4-209ENST00000601357 PDE3AQ14432 1141 aa27.68■■■□□ 2.02
SSBP4-209ENST00000601357 CHMP4BQ9H444 224 aaKnown RBP27.68■■■□□ 2.02
SSBP4-209ENST00000601357 ADGRA2Q96PE1 1338 aa27.67■■■□□ 2.02
SSBP4-209ENST00000601357 ZSWIM8A7E2V4 1837 aa27.67■■■□□ 2.02
SSBP4-209ENST00000601357 ATAD5Q96QE3 1844 aa27.67■■■□□ 2.02
SSBP4-209ENST00000601357 A0A0G2JLL6 359 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-209ENST00000601357 FAM196BA6NMK8 535 aa27.67■■■□□ 2.02
SSBP4-209ENST00000601357 C20orf194Q5TEA3 1177 aa27.67■■■□□ 2.02
SSBP4-209ENST00000601357 GPAT2Q6NUI2 795 aa27.67■■■□□ 2.02
SSBP4-209ENST00000601357 PRRT2Q7Z6L0 340 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-209ENST00000601357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.67■■■□□ 2.02
SSBP4-209ENST00000601357 KIF1BPQ96EK5 621 aa27.66■■■□□ 2.02
SSBP4-209ENST00000601357 NDUFB9Q9Y6M9 179 aa27.66■■■□□ 2.02
SSBP4-209ENST00000601357 LACTBP83111 547 aaPredicted RBP27.65■■■□□ 2.02
SSBP4-209ENST00000601357 C17orf99Q6UX52 265 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms