RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TTC14Q96N46 770 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 MKRN1Q9UHC7 482 aaKnown RBP26.75■■□□□ 1.87
IRF3-228ENST00000601291 NAV1Q8NEY1 1877 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 K7ELQ4 463 aaPredicted RBP26.75■■□□□ 1.87
IRF3-228ENST00000601291 CTDSPL2Q05D32 466 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 AKNAD1Q5T1N1 836 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 CDC42EP5Q6NZY7 148 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 MAPKAPK5Q8IW41 473 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 CNNM2Q9H8M5 875 aa26.75■■□□□ 1.87
IRF3-228ENST00000601291 FLT1P17948 1338 aa26.74■■□□□ 1.87
IRF3-228ENST00000601291 SLC3A2P08195 630 aaKnown RBP26.74■■□□□ 1.87
IRF3-228ENST00000601291 MFSD6Q6ZSS7 791 aa26.74■■□□□ 1.87
IRF3-228ENST00000601291 STAG1Q8WVM7 1258 aa26.74■■□□□ 1.87
IRF3-228ENST00000601291 GOLGB1Q14789 3259 aaKnown RBP26.74■■□□□ 1.87
IRF3-228ENST00000601291 LAMB1P07942 1786 aa26.74■■□□□ 1.87
IRF3-228ENST00000601291 DHX32Q7L7V1 743 aaKnown RBP26.73■■□□□ 1.87
IRF3-228ENST00000601291 BAZ2AQ9UIF9 1905 aaKnown RBP26.72■■□□□ 1.87
IRF3-228ENST00000601291 KRT23Q9C075 422 aa26.72■■□□□ 1.87
IRF3-228ENST00000601291 FOCADQ5VW36 1801 aa26.72■■□□□ 1.87
IRF3-228ENST00000601291 CDK5RAP2Q96SN8 1893 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 PCP11498 1178 aaKnown RBP26.71■■□□□ 1.87
IRF3-228ENST00000601291 AK2P54819 239 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 ANKRD1Q15327 319 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 DLGAP5Q15398 846 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 GPR162Q16538 588 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 ALDH8A1Q9H2A2 487 aaPredicted RBP26.71■■□□□ 1.87
IRF3-228ENST00000601291 GJA3Q9Y6H8 435 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 DICER1Q9UPY3 1922 aaKnown RBP26.71■■□□□ 1.87
IRF3-228ENST00000601291 WDHD1O75717 1129 aaPredicted RBP26.71■■□□□ 1.87
IRF3-228ENST00000601291 POLR3DP05423 398 aaPredicted RBP26.71■■□□□ 1.87
IRF3-228ENST00000601291 PICALMQ13492 652 aa26.71■■□□□ 1.87
IRF3-228ENST00000601291 DDX60LQ5H9U9 1706 aaKnown RBP26.7■■□□□ 1.87
IRF3-228ENST00000601291 NEDD4P46934 1319 aa26.7■■□□□ 1.87
IRF3-228ENST00000601291 ZNF541Q9H0D2 1346 aa26.7■■□□□ 1.87
IRF3-228ENST00000601291 CYP2D7A0A087X1C5 515 aa26.7■■□□□ 1.86
IRF3-228ENST00000601291 MCM5P33992 734 aa26.7■■□□□ 1.86
IRF3-228ENST00000601291 SLC4A3P48751 1232 aa26.7■■□□□ 1.86
IRF3-228ENST00000601291 C12orf60Q5U649 245 aa26.7■■□□□ 1.86
IRF3-228ENST00000601291 MB21D2Q8IYB1 491 aaPredicted RBP26.7■■□□□ 1.86
IRF3-228ENST00000601291 DPF2Q92785 391 aa26.7■■□□□ 1.86
IRF3-228ENST00000601291 PCDHAC2Q9Y5I4 1007 aa26.7■■□□□ 1.86
IRF3-228ENST00000601291 SPDYE2BA6NHP3 402 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 SPDYE6P0CI01 402 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 FGD1P98174 961 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 MTMR14Q8NCE2 650 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 TOMM22Q9NS69 142 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 TMOD2Q9NZR1 351 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 RNF181Q9P0P0 153 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 SAP30BPQ9UHR5 308 aaKnown RBP26.69■■□□□ 1.86
IRF3-228ENST00000601291 ECM29Q5VYK3 1845 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 WDR19Q8NEZ3 1342 aa26.69■■□□□ 1.86
IRF3-228ENST00000601291 GMPSP49915 693 aaPredicted RBP26.68■■□□□ 1.86
IRF3-228ENST00000601291 EXOSC10Q01780 885 aaKnown RBP26.68■■□□□ 1.86
IRF3-228ENST00000601291 COL9A3Q14050 684 aaPredicted RBP26.68■■□□□ 1.86
IRF3-228ENST00000601291 NOL8Q76FK4 1167 aaKnown RBP26.68■■□□□ 1.86
IRF3-228ENST00000601291 TCEANC2Q96MN5 208 aa26.68■■□□□ 1.86
IRF3-228ENST00000601291 IDI2Q9BXS1 227 aa26.68■■□□□ 1.86
IRF3-228ENST00000601291 SBF1O95248 1867 aa26.68■■□□□ 1.86
IRF3-228ENST00000601291 ROBO3Q96MS0 1386 aa26.68■■□□□ 1.86
IRF3-228ENST00000601291 GRIN3BO60391 1043 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 CYP2D6P10635 497 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 PDE4BQ07343 736 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 PRMT6Q96LA8 375 aaPredicted RBP26.67■■□□□ 1.86
IRF3-228ENST00000601291 B4E1Z4 1266 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 GPC2Q8N158 579 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 STK11IPQ8N1F8 1099 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 OSBPL5Q9H0X9 879 aaPredicted RBP26.67■■□□□ 1.86
IRF3-228ENST00000601291 TDRD3Q9H7E2 651 aaKnown RBP26.67■■□□□ 1.86
IRF3-228ENST00000601291 DDX4Q9NQI0 724 aaKnown RBP26.67■■□□□ 1.86
IRF3-228ENST00000601291 LIMCH1Q9UPQ0 1083 aa26.67■■□□□ 1.86
IRF3-228ENST00000601291 PRC1O43663 620 aa26.66■■□□□ 1.86
IRF3-228ENST00000601291 MYO1BO43795 1136 aa26.66■■□□□ 1.86
IRF3-228ENST00000601291 NPM3O75607 178 aaKnown RBP26.66■■□□□ 1.86
IRF3-228ENST00000601291 ZNF280AP59817 542 aaPredicted RBP26.66■■□□□ 1.86
IRF3-228ENST00000601291 SLC4A8Q2Y0W8 1093 aa26.66■■□□□ 1.86
IRF3-228ENST00000601291 RRP12Q5JTH9 1297 aaKnown RBP26.66■■□□□ 1.86
IRF3-228ENST00000601291 Q6ZUG5 572 aa26.66■■□□□ 1.86
IRF3-228ENST00000601291 MYOZ2Q9NPC6 264 aa26.66■■□□□ 1.86
IRF3-228ENST00000601291 HSP90AA1P07900 732 aaKnown RBP26.65■■□□□ 1.86
IRF3-228ENST00000601291 FGRP09769 529 aa26.65■■□□□ 1.86
IRF3-228ENST00000601291 NT5C2P49902 561 aa26.65■■□□□ 1.86
IRF3-228ENST00000601291 TTC6Q86TZ1 520 aa26.65■■□□□ 1.86
IRF3-228ENST00000601291 ESR2Q92731 530 aa26.65■■□□□ 1.86
IRF3-228ENST00000601291 ZNF287Q9HBT7 754 aa26.65■■□□□ 1.86
IRF3-228ENST00000601291 KDM4AO75164 1064 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 NFIAQ12857 509 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 TOB2Q14106 344 aaPredicted RBP26.64■■□□□ 1.86
IRF3-228ENST00000601291 C9orf131Q5VYM1 1079 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 MICALL2Q8IY33 904 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 TMX3Q96JJ7 454 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 ZSCAN31Q96LW9 406 aaPredicted RBP26.64■■□□□ 1.86
IRF3-228ENST00000601291 INCENPQ9NQS7 918 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 TACC3Q9Y6A5 838 aa26.64■■□□□ 1.86
IRF3-228ENST00000601291 ORC4O43929 436 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 CHST3Q7LGC8 479 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.63■■□□□ 1.85
IRF3-228ENST00000601291 MYH1P12882 1939 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 SMIM22K7EJ46 135 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 HLA-DOAP06340 250 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 PLCD1P51178 756 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms