RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ZHX2Q9Y6X8 837 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 IL16Q14005 1332 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 PDE8BO95263 885 aa12.51□□□□□ -0.41
HIF3A-219ENST00000600879 BMP8BP34820 402 aa12.51□□□□□ -0.41
HIF3A-219ENST00000600879 NOL9Q5SY16 702 aaKnown RBP12.51□□□□□ -0.41
HIF3A-219ENST00000600879 VGLL2Q8N8G2 317 aa12.51□□□□□ -0.41
HIF3A-219ENST00000600879 UBE2OQ9C0C9 1292 aaKnown RBP12.51□□□□□ -0.41
HIF3A-219ENST00000600879 FAM198AQ9UFP1 575 aa12.51□□□□□ -0.41
HIF3A-219ENST00000600879 MGAMO43451 1857 aa12.51□□□□□ -0.41
HIF3A-219ENST00000600879 TRIM75PA6NK02 468 aa12.5□□□□□ -0.41
HIF3A-219ENST00000600879 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
HIF3A-219ENST00000600879 ANKRD44Q8N8A2 993 aa12.5□□□□□ -0.41
HIF3A-219ENST00000600879 SMCR8Q8TEV9 937 aaPredicted RBP12.5□□□□□ -0.41
HIF3A-219ENST00000600879 MRIQ9BWK5 157 aa12.5□□□□□ -0.41
HIF3A-219ENST00000600879 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
HIF3A-219ENST00000600879 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 A0A0G2JLL6 359 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-219ENST00000600879 CXCL11O14625 94 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 PEX10O60683 326 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 IFIT1P09914 478 aaKnown RBP12.49□□□□□ -0.41
HIF3A-219ENST00000600879 PRDX5P30044 214 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 MDM2Q00987 491 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-219ENST00000600879 LRIT3Q3SXY7 679 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 TREML2Q5T2D2 321 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 PRRT2Q7Z6L0 340 aaPredicted RBP12.49□□□□□ -0.41
HIF3A-219ENST00000600879 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 PXYLP1Q8TE99 480 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 SUGT1Q9Y2Z0 365 aa12.49□□□□□ -0.41
HIF3A-219ENST00000600879 PHF20L1A8MW92 1017 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 PTPRAP18433 802 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 IRF5Q13568 498 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
HIF3A-219ENST00000600879 FASTKD5Q7L8L6 764 aaKnown RBP12.48□□□□□ -0.41
HIF3A-219ENST00000600879 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
HIF3A-219ENST00000600879 WDR66Q8TBY9 1149 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 C11orf49Q9H6J7 331 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 VCANP13611 3396 aa12.48□□□□□ -0.41
HIF3A-219ENST00000600879 PFASO15067 1338 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 RPTORQ8N122 1335 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 FGFR2P21802 821 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 RGS3P49796 1198 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-219ENST00000600879 GPR153Q6NV75 609 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 MIER1Q8N108 512 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 COA7Q96BR5 231 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 AFG3L2Q9Y4W6 797 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 CACNA1FO60840 1977 aa12.47□□□□□ -0.41
HIF3A-219ENST00000600879 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
HIF3A-219ENST00000600879 ATRNL1Q5VV63 1379 aa12.46□□□□□ -0.41
HIF3A-219ENST00000600879 DDX60LQ5H9U9 1706 aaKnown RBP12.46□□□□□ -0.41
HIF3A-219ENST00000600879 LDHBP07195 334 aaKnown RBP12.46□□□□□ -0.41
HIF3A-219ENST00000600879 SLC5A1P13866 664 aa12.46□□□□□ -0.41
HIF3A-219ENST00000600879 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.41
HIF3A-219ENST00000600879 UTYO14607 1347 aa12.45□□□□□ -0.42
HIF3A-219ENST00000600879 DDTLA6NHG4 134 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-219ENST00000600879 HMGCRP04035 888 aa12.45□□□□□ -0.42
HIF3A-219ENST00000600879 PICALMQ13492 652 aa12.45□□□□□ -0.42
HIF3A-219ENST00000600879 LRRC26Q2I0M4 334 aa12.45□□□□□ -0.42
HIF3A-219ENST00000600879 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
HIF3A-219ENST00000600879 TRIB2Q92519 343 aa12.45□□□□□ -0.42
HIF3A-219ENST00000600879 HMX1Q9NP08 348 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-219ENST00000600879 DOCK2Q92608 1830 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 CYP2B6P20813 491 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 LPIN2Q92539 896 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 SIL1Q9H173 461 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 AGTPBP1Q9UPW5 1226 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 MYH13Q9UKX3 1938 aa12.44□□□□□ -0.42
HIF3A-219ENST00000600879 KIF16BQ96L93 1317 aa12.43□□□□□ -0.42
HIF3A-219ENST00000600879 EYA2O00167 538 aa12.43□□□□□ -0.42
HIF3A-219ENST00000600879 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
HIF3A-219ENST00000600879 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
HIF3A-219ENST00000600879 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
HIF3A-219ENST00000600879 DDX4Q9NQI0 724 aaKnown RBP12.43□□□□□ -0.42
HIF3A-219ENST00000600879 RAPGEFL1Q9UHV5 662 aa12.43□□□□□ -0.42
HIF3A-219ENST00000600879 GJD2Q9UKL4 321 aa12.43□□□□□ -0.42
HIF3A-219ENST00000600879 SPTBN5Q9NRC6 3674 aaKnown RBP12.43□□□□□ -0.42
HIF3A-219ENST00000600879 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 ENTPD3O75355 529 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 PHKA1P46020 1223 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-219ENST00000600879 ATP2B3Q16720 1220 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 FAM110CQ1W6H9 321 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 OGDHLQ9ULD0 1010 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
HIF3A-219ENST00000600879 LAMA2P24043 3122 aaKnown RBP12.41□□□□□ -0.42
HIF3A-219ENST00000600879 CCER2I3L3R5 266 aa12.41□□□□□ -0.42
HIF3A-219ENST00000600879 CTNND1O60716 968 aaKnown RBP12.41□□□□□ -0.42
HIF3A-219ENST00000600879 CCND3P30281 292 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-219ENST00000600879 HMGCS2P54868 508 aa12.41□□□□□ -0.42
HIF3A-219ENST00000600879 SPP2Q13103 211 aa12.41□□□□□ -0.42
HIF3A-219ENST00000600879 ATG9AQ7Z3C6 839 aa12.41□□□□□ -0.42
HIF3A-219ENST00000600879 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
HIF3A-219ENST00000600879 IDI2Q9BXS1 227 aa12.41□□□□□ -0.42
HIF3A-219ENST00000600879 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms