RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 OTOP1Q7RTM1 612 aa19.42■□□□□ 0.7
VRK3-221ENST00000600284 FAM43AQ8N2R8 423 aa19.42■□□□□ 0.7
VRK3-221ENST00000600284 ZNF384Q8TF68 577 aa19.42■□□□□ 0.7
VRK3-221ENST00000600284 TRIM17Q9Y577 477 aa19.42■□□□□ 0.7
VRK3-221ENST00000600284 RHBDL3P58872 404 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 ARHGEF6Q15052 776 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 TTC39AQ5SRH9 613 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 TBC1D9Q6ZT07 1266 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 RAI14Q9P0K7 980 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 LRP2BPQ9P2M1 347 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 KCNH4Q9UQ05 1017 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 ATRNL1Q5VV63 1379 aa19.41■□□□□ 0.7
VRK3-221ENST00000600284 PHF20L1A8MW92 1017 aa19.4■□□□□ 0.7
VRK3-221ENST00000600284 BTBD19C9JJ37 291 aa19.4■□□□□ 0.7
VRK3-221ENST00000600284 CEP85Q6P2H3 762 aa19.4■□□□□ 0.7
VRK3-221ENST00000600284 SH3BP5LQ7L8J4 393 aa19.4■□□□□ 0.7
VRK3-221ENST00000600284 ZSCAN29Q8IWY8 852 aaPredicted RBP19.4■□□□□ 0.7
VRK3-221ENST00000600284 DBNDD2Q9BQY9 259 aa19.4■□□□□ 0.7
VRK3-221ENST00000600284 DDX4Q9NQI0 724 aaKnown RBP19.4■□□□□ 0.7
VRK3-221ENST00000600284 AK9Q5TCS8 1911 aa19.39■□□□□ 0.7
VRK3-221ENST00000600284 DDTLA6NHG4 134 aaPredicted RBP19.39■□□□□ 0.69
VRK3-221ENST00000600284 CXCL11O14625 94 aa19.39■□□□□ 0.69
VRK3-221ENST00000600284 TLR2O60603 784 aa19.39■□□□□ 0.69
VRK3-221ENST00000600284 CD99L2Q8TCZ2 262 aa19.39■□□□□ 0.69
VRK3-221ENST00000600284 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
VRK3-221ENST00000600284 EFCC1Q9HA90 598 aa19.39■□□□□ 0.69
VRK3-221ENST00000600284 TBC1D12O60347 775 aa19.38■□□□□ 0.69
VRK3-221ENST00000600284 SOX10P56693 466 aa19.38■□□□□ 0.69
VRK3-221ENST00000600284 PICALMQ13492 652 aa19.38■□□□□ 0.69
VRK3-221ENST00000600284 ANKRD23Q86SG2 305 aa19.38■□□□□ 0.69
VRK3-221ENST00000600284 ERC1Q8IUD2 1116 aa19.38■□□□□ 0.69
VRK3-221ENST00000600284 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
VRK3-221ENST00000600284 PTPN22Q9Y2R2 807 aa19.38■□□□□ 0.69
VRK3-221ENST00000600284 CTNND1O60716 968 aaKnown RBP19.37■□□□□ 0.69
VRK3-221ENST00000600284 HSP90AB4PQ58FF6 505 aa19.37■□□□□ 0.69
VRK3-221ENST00000600284 SCYL3Q8IZE3 742 aa19.37■□□□□ 0.69
VRK3-221ENST00000600284 NOL10Q9BSC4 688 aaKnown RBP19.37■□□□□ 0.69
VRK3-221ENST00000600284 PICK1Q9NRD5 415 aa19.37■□□□□ 0.69
VRK3-221ENST00000600284 BAG3O95817 575 aa19.36■□□□□ 0.69
VRK3-221ENST00000600284 EAF2Q96CJ1 260 aaPredicted RBP19.36■□□□□ 0.69
VRK3-221ENST00000600284 CHMP4BQ9H444 224 aaKnown RBP19.36■□□□□ 0.69
VRK3-221ENST00000600284 SNRKQ9NRH2 765 aa19.36■□□□□ 0.69
VRK3-221ENST00000600284 DBNLQ9UJU6 430 aaKnown RBP19.36■□□□□ 0.69
VRK3-221ENST00000600284 DDX19BQ9UMR2 479 aa19.36■□□□□ 0.69
VRK3-221ENST00000600284 COL2A1P02458 1487 aaPredicted RBP19.35■□□□□ 0.69
VRK3-221ENST00000600284 CYP2E1P05181 493 aaPredicted RBP19.35■□□□□ 0.69
VRK3-221ENST00000600284 PLCG2P16885 1265 aa19.35■□□□□ 0.69
VRK3-221ENST00000600284 PTPRAP18433 802 aa19.35■□□□□ 0.69
VRK3-221ENST00000600284 PPP4CP60510 307 aa19.35■□□□□ 0.69
VRK3-221ENST00000600284 NAA16Q6N069 864 aaPredicted RBP19.35■□□□□ 0.69
VRK3-221ENST00000600284 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
VRK3-221ENST00000600284 ZAP70P43403 619 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 MOGSQ13724 837 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 KIF22Q14807 665 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 TEX11Q8IYF3 940 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 CCDC8Q9H0W5 538 aaPredicted RBP19.34■□□□□ 0.69
VRK3-221ENST00000600284 OSBPL5Q9H0X9 879 aaPredicted RBP19.34■□□□□ 0.69
VRK3-221ENST00000600284 AFG3L2Q9Y4W6 797 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 ZHX2Q9Y6X8 837 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 DOCK2Q92608 1830 aa19.34■□□□□ 0.69
VRK3-221ENST00000600284 PDHXO00330 501 aa19.33■□□□□ 0.68
VRK3-221ENST00000600284 GNRH1P01148 92 aa19.33■□□□□ 0.68
VRK3-221ENST00000600284 TMED8Q6PL24 325 aaPredicted RBP19.33■□□□□ 0.68
VRK3-221ENST00000600284 C17orf99Q6UX52 265 aa19.33■□□□□ 0.68
VRK3-221ENST00000600284 FASTKD5Q7L8L6 764 aaKnown RBP19.33■□□□□ 0.68
VRK3-221ENST00000600284 DHX36Q9H2U1 1008 aaKnown RBP19.33■□□□□ 0.68
VRK3-221ENST00000600284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.33■□□□□ 0.68
VRK3-221ENST00000600284 RCAN3Q9UKA8 241 aa19.33■□□□□ 0.68
VRK3-221ENST00000600284 A0A0G2JLL6 359 aaPredicted RBP19.32■□□□□ 0.68
VRK3-221ENST00000600284 CAP1Q01518 475 aa19.32■□□□□ 0.68
VRK3-221ENST00000600284 PRRT2Q7Z6L0 340 aaPredicted RBP19.32■□□□□ 0.68
VRK3-221ENST00000600284 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
VRK3-221ENST00000600284 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
VRK3-221ENST00000600284 EXOC6BQ9Y2D4 811 aa19.32■□□□□ 0.68
VRK3-221ENST00000600284 HMMRO75330 724 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 LACTBP83111 547 aaPredicted RBP19.31■□□□□ 0.68
VRK3-221ENST00000600284 GPAT2Q6NUI2 795 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 SH3RF3Q8TEJ3 882 aaPredicted RBP19.31■□□□□ 0.68
VRK3-221ENST00000600284 ARMC5Q96C12 935 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 AATFQ9NY61 560 aaKnown RBP eCLIP19.31■□□□□ 0.68
VRK3-221ENST00000600284 PI4KBQ9UBF8 816 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 HERC5Q9UII4 1024 aaKnown RBP19.31■□□□□ 0.68
VRK3-221ENST00000600284 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 SLC45A1Q9Y2W3 748 aa19.31■□□□□ 0.68
VRK3-221ENST00000600284 PRMT2P55345 433 aa19.3■□□□□ 0.68
VRK3-221ENST00000600284 AACSQ86V21 672 aa19.3■□□□□ 0.68
VRK3-221ENST00000600284 RHPN1Q8TCX5 695 aa19.3■□□□□ 0.68
VRK3-221ENST00000600284 PARK7Q99497 189 aaKnown RBP19.3■□□□□ 0.68
VRK3-221ENST00000600284 TBC1D2Q9BYX2 928 aa19.3■□□□□ 0.68
VRK3-221ENST00000600284 PIH1D3Q9NQM4 214 aaKnown RBP19.3■□□□□ 0.68
VRK3-221ENST00000600284 ADGRA1Q86SQ6 560 aa19.29■□□□□ 0.68
VRK3-221ENST00000600284 NBPF11Q86T75 865 aa19.29■□□□□ 0.68
VRK3-221ENST00000600284 ADGRA2Q96PE1 1338 aa19.28■□□□□ 0.68
VRK3-221ENST00000600284 SLURP2P0DP57 97 aa19.28■□□□□ 0.68
VRK3-221ENST00000600284 PDE3AQ14432 1141 aa19.28■□□□□ 0.68
VRK3-221ENST00000600284 FOXP4Q8IVH2 680 aaPredicted RBP19.28■□□□□ 0.68
VRK3-221ENST00000600284 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
VRK3-221ENST00000600284 TGFBRAP1Q8WUH2 860 aa19.28■□□□□ 0.68
VRK3-221ENST00000600284 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms