RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 AKNAD1Q5T1N1 836 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 RALYLQ86SE5 291 aaKnown RBP17.9■□□□□ 0.46
VRK3-218ENST00000600031 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
VRK3-218ENST00000600031 NEDD4P46934 1319 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 USP17L12C9JPN9 530 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 USP17L21D6R901 530 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 ANTXR2P58335 489 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 TRDNQ13061 729 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 MKRN1Q9UHC7 482 aaKnown RBP17.9■□□□□ 0.46
VRK3-218ENST00000600031 ANAPC4Q9UJX5 808 aa17.9■□□□□ 0.46
VRK3-218ENST00000600031 FER1L6Q2WGJ9 1857 aa17.89■□□□□ 0.46
VRK3-218ENST00000600031 B4E1Z4 1266 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 MCM5P33992 734 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 USP5P45974 858 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 RHBDL3P58872 404 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 EVX2Q03828 476 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 KIAA0825Q8IV33 1275 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 STAG1Q8WVM7 1258 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 BRF1Q92994 677 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 ZSCAN31Q96LW9 406 aaPredicted RBP17.89■□□□□ 0.45
VRK3-218ENST00000600031 AGXT2Q9BYV1 514 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 VPS33BQ9H267 617 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 PRC1O43663 620 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 IARSP41252 1262 aaKnown RBP17.89■□□□□ 0.45
VRK3-218ENST00000600031 CYB5R4Q7L1T6 521 aa17.89■□□□□ 0.45
VRK3-218ENST00000600031 NFKBIEO00221 500 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 BAG4O95429 457 aaKnown RBP17.88■□□□□ 0.45
VRK3-218ENST00000600031 CYP2D6P10635 497 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 FGD1P98174 961 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 ST3GAL1Q11201 340 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 MFSD6Q6ZSS7 791 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 CERS3Q8IU89 383 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 INTS4Q96HW7 963 aaKnown RBP17.88■□□□□ 0.45
VRK3-218ENST00000600031 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 GPHNQ9NQX3 736 aaPredicted RBP17.88■□□□□ 0.45
VRK3-218ENST00000600031 SH2B1Q9NRF2 756 aaPredicted RBP17.88■□□□□ 0.45
VRK3-218ENST00000600031 ADAMTSL1Q8N6G6 1762 aa17.88■□□□□ 0.45
VRK3-218ENST00000600031 CDK5RAP2Q96SN8 1893 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 USP17L8P0C7I0 530 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 TEX11Q8IYF3 940 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 NECAB1Q8N987 351 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 MCM9Q9NXL9 1143 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 RAD17O75943 681 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 PLCG2P16885 1265 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 KLHL40Q2TBA0 621 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 SBK1Q52WX2 424 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 MAPKAPK5Q8IW41 473 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 CCDC83Q8IWF9 413 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 FBXL16Q8N461 479 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 TEKT1Q969V4 418 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 PSME4Q14997 1843 aa17.87■□□□□ 0.45
VRK3-218ENST00000600031 CRKP46108 304 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
VRK3-218ENST00000600031 HHIPL2Q6UWX4 724 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 ZSWIM5Q9P217 1185 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 ARPP21Q9UBL0 812 aaPredicted RBP17.86■□□□□ 0.45
VRK3-218ENST00000600031 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 KDM4AO75164 1064 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 SLC4A8Q2Y0W8 1093 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 APOBEC3HQ6NTF7 200 aaKnown RBP17.86■□□□□ 0.45
VRK3-218ENST00000600031 NIM1KQ8IY84 436 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 KRT23Q9C075 422 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 RNF41Q9H4P4 317 aaPredicted RBP17.86■□□□□ 0.45
VRK3-218ENST00000600031 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.86■□□□□ 0.45
VRK3-218ENST00000600031 ZNRF3Q9ULT6 936 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 PCDHAC2Q9Y5I4 1007 aa17.86■□□□□ 0.45
VRK3-218ENST00000600031 CLCN1P35523 988 aa17.85■□□□□ 0.45
VRK3-218ENST00000600031 STK3Q13188 491 aa17.85■□□□□ 0.45
VRK3-218ENST00000600031 MRIQ9BWK5 157 aa17.85■□□□□ 0.45
VRK3-218ENST00000600031 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
VRK3-218ENST00000600031 LAMB1P07942 1786 aa17.85■□□□□ 0.45
VRK3-218ENST00000600031 PSMD14O00487 310 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 DTNBO60941 627 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 VIL1P09327 827 aaKnown RBP17.84■□□□□ 0.45
VRK3-218ENST00000600031 C12orf60Q5U649 245 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 ZDHHC15Q96MV8 337 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 FHDC1Q9C0D6 1143 aaPredicted RBP17.84■□□□□ 0.45
VRK3-218ENST00000600031 NAV1Q8NEY1 1877 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 FLT1P17948 1338 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 FGRP09769 529 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 RSBN1LQ6PCB5 846 aaPredicted RBP17.84■□□□□ 0.45
VRK3-218ENST00000600031 GAS2L3Q86XJ1 694 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 USP40Q9NVE5 1235 aa17.84■□□□□ 0.45
VRK3-218ENST00000600031 SAP30BPQ9UHR5 308 aaKnown RBP17.84■□□□□ 0.45
VRK3-218ENST00000600031 HDLBPQ00341 1268 aaKnown RBP17.83■□□□□ 0.45
VRK3-218ENST00000600031 RASSF7Q02833 373 aa17.83■□□□□ 0.45
VRK3-218ENST00000600031 CDC42EP5Q6NZY7 148 aa17.83■□□□□ 0.45
VRK3-218ENST00000600031 DDX49Q9Y6V7 483 aaKnown RBP17.83■□□□□ 0.45
VRK3-218ENST00000600031 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
VRK3-218ENST00000600031 PRDM1O75626 825 aa17.83■□□□□ 0.44
VRK3-218ENST00000600031 IGDCC4Q8TDY8 1250 aa17.83■□□□□ 0.44
VRK3-218ENST00000600031 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.83■□□□□ 0.44
VRK3-218ENST00000600031 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.83■□□□□ 0.44
VRK3-218ENST00000600031 UTRNP46939 3433 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 SH2B2O14492 632 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms