RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 TCP10Q12799 353 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 GIMAP6Q6P9H5 292 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 CCDC129Q6ZRS4 1044 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 ZSCAN29Q8IWY8 852 aaPredicted RBP22.77■■□□□ 1.24
COPE-209ENST00000599964 AMOTL1Q8IY63 956 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 HOOK2Q96ED9 719 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 FAM198AQ9UFP1 575 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 FOCADQ5VW36 1801 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 FLT1P17948 1338 aa22.77■■□□□ 1.24
COPE-209ENST00000599964 KIAA1211Q6ZU35 1233 aa22.76■■□□□ 1.23
COPE-209ENST00000599964 USP48Q86UV5 1035 aa22.76■■□□□ 1.23
COPE-209ENST00000599964 SDR42E1Q8WUS8 393 aa22.76■■□□□ 1.23
COPE-209ENST00000599964 OSBPL5Q9H0X9 879 aaPredicted RBP22.76■■□□□ 1.23
COPE-209ENST00000599964 DHX36Q9H2U1 1008 aaKnown RBP22.76■■□□□ 1.23
COPE-209ENST00000599964 CDK5RAP2Q96SN8 1893 aa22.75■■□□□ 1.23
COPE-209ENST00000599964 COL2A1P02458 1487 aaPredicted RBP22.75■■□□□ 1.23
COPE-209ENST00000599964 SGSM2O43147 1006 aa22.75■■□□□ 1.23
COPE-209ENST00000599964 PRKAB2O43741 272 aa22.75■■□□□ 1.23
COPE-209ENST00000599964 EIF5BO60841 1220 aaKnown RBP22.75■■□□□ 1.23
COPE-209ENST00000599964 ZNF589Q86UQ0 364 aaPredicted RBP22.75■■□□□ 1.23
COPE-209ENST00000599964 ESYT1Q9BSJ8 1104 aa22.75■■□□□ 1.23
COPE-209ENST00000599964 GLIS2Q9BZE0 524 aaPredicted RBP22.75■■□□□ 1.23
COPE-209ENST00000599964 DDX4Q9NQI0 724 aaKnown RBP22.75■■□□□ 1.23
COPE-209ENST00000599964 CNTNAP1P78357 1384 aa22.75■■□□□ 1.23
COPE-209ENST00000599964 ADM5C9JUS6 153 aa22.74■■□□□ 1.23
COPE-209ENST00000599964 NF2P35240 595 aa22.74■■□□□ 1.23
COPE-209ENST00000599964 TDO2P48775 406 aa22.74■■□□□ 1.23
COPE-209ENST00000599964 SUPT20HL1Q3ZLR7 823 aa22.74■■□□□ 1.23
COPE-209ENST00000599964 DCP1AQ9NPI6 582 aaPredicted RBP22.74■■□□□ 1.23
COPE-209ENST00000599964 MCM9Q9NXL9 1143 aa22.74■■□□□ 1.23
COPE-209ENST00000599964 POLR2AP24928 1970 aaKnown RBP22.74■■□□□ 1.23
COPE-209ENST00000599964 GSG1L2A8MUP6 293 aa22.73■■□□□ 1.23
COPE-209ENST00000599964 HLA-DOAP06340 250 aa22.73■■□□□ 1.23
COPE-209ENST00000599964 FSTL1Q12841 308 aa22.73■■□□□ 1.23
COPE-209ENST00000599964 TTC6Q86TZ1 520 aa22.73■■□□□ 1.23
COPE-209ENST00000599964 TMEM39BQ9GZU3 492 aa22.73■■□□□ 1.23
COPE-209ENST00000599964 SCAF8Q9UPN6 1271 aaKnown RBP22.73■■□□□ 1.23
COPE-209ENST00000599964 NAV1Q8NEY1 1877 aa22.73■■□□□ 1.23
COPE-209ENST00000599964 POLR3DP05423 398 aaPredicted RBP22.72■■□□□ 1.23
COPE-209ENST00000599964 HSPD1P10809 573 aaKnown RBP22.72■■□□□ 1.23
COPE-209ENST00000599964 IFNL3Q8IZI9 196 aa22.72■■□□□ 1.23
COPE-209ENST00000599964 CDCA5Q96FF9 252 aa22.72■■□□□ 1.23
COPE-209ENST00000599964 NAPBQ9H115 298 aa22.72■■□□□ 1.23
COPE-209ENST00000599964 ARPP21Q9UBL0 812 aaPredicted RBP22.72■■□□□ 1.23
COPE-209ENST00000599964 MKRN1Q9UHC7 482 aaKnown RBP22.72■■□□□ 1.23
COPE-209ENST00000599964 SAP30BPQ9UHR5 308 aaKnown RBP22.72■■□□□ 1.23
COPE-209ENST00000599964 ATRNL1Q5VV63 1379 aa22.72■■□□□ 1.23
COPE-209ENST00000599964 CSRNP1Q96S65 589 aa22.71■■□□□ 1.23
COPE-209ENST00000599964 DSCC1Q9BVC3 393 aa22.71■■□□□ 1.23
COPE-209ENST00000599964 ALX1Q15699 326 aa22.7■■□□□ 1.22
COPE-209ENST00000599964 ZFPM1Q8IX07 1006 aa22.7■■□□□ 1.22
COPE-209ENST00000599964 PI4KBQ9UBF8 816 aa22.7■■□□□ 1.22
COPE-209ENST00000599964 CTNNA3Q9UI47 895 aa22.7■■□□□ 1.22
COPE-209ENST00000599964 PALD1Q9ULE6 856 aa22.7■■□□□ 1.22
COPE-209ENST00000599964 MYH1P12882 1939 aa22.7■■□□□ 1.22
COPE-209ENST00000599964 ZMYM6O95789 1325 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 REC8O95072 547 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 ITGBL1O95965 494 aaPredicted RBP22.69■■□□□ 1.22
COPE-209ENST00000599964 VPS53Q5VIR6 699 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 DCAF15Q66K64 600 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 TEPSINQ96N21 525 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 TRIM34Q9BYJ4 488 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 ANO2Q9NQ90 1003 aa22.69■■□□□ 1.22
COPE-209ENST00000599964 DDTLA6NHG4 134 aaPredicted RBP22.68■■□□□ 1.22
COPE-209ENST00000599964 USP17L12C9JPN9 530 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 USP17L21D6R901 530 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 TRAF5O00463 557 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 SBK1Q52WX2 424 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 NBPF12Q5TAG4 269 aaPredicted RBP22.68■■□□□ 1.22
COPE-209ENST00000599964 PRAMEF18Q5VWM3 479 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 FOXP4Q8IVH2 680 aaPredicted RBP22.68■■□□□ 1.22
COPE-209ENST00000599964 CRACR2BQ8N4Y2 399 aaPredicted RBP22.68■■□□□ 1.22
COPE-209ENST00000599964 IL25Q9H293 177 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 EPB41L4AQ9HCS5 686 aaPredicted RBP22.68■■□□□ 1.22
COPE-209ENST00000599964 TAOK2Q9UL54 1235 aa22.68■■□□□ 1.22
COPE-209ENST00000599964 CTR9Q6PD62 1173 aa22.67■■□□□ 1.22
COPE-209ENST00000599964 SH3BP5LQ7L8J4 393 aa22.67■■□□□ 1.22
COPE-209ENST00000599964 U3KPZ7 1027 aaPredicted RBP22.67■■□□□ 1.22
COPE-209ENST00000599964 DDX60LQ5H9U9 1706 aaKnown RBP22.67■■□□□ 1.22
COPE-209ENST00000599964 PPP1R12BO60237 982 aaPredicted RBP22.66■■□□□ 1.22
COPE-209ENST00000599964 FGAP02671 866 aa22.66■■□□□ 1.22
COPE-209ENST00000599964 SLC3A2P08195 630 aaKnown RBP22.66■■□□□ 1.22
COPE-209ENST00000599964 C12orf60Q5U649 245 aa22.66■■□□□ 1.22
COPE-209ENST00000599964 EHD4Q9H223 541 aa22.66■■□□□ 1.22
COPE-209ENST00000599964 ZNF408Q9H9D4 720 aa22.66■■□□□ 1.22
COPE-209ENST00000599964 HERC5Q9UII4 1024 aaKnown RBP22.66■■□□□ 1.22
COPE-209ENST00000599964 BAZ2AQ9UIF9 1905 aaKnown RBP22.66■■□□□ 1.22
COPE-209ENST00000599964 MINDY4BA8MYZ0 360 aa22.65■■□□□ 1.22
COPE-209ENST00000599964 FOXP2O15409 715 aa22.65■■□□□ 1.22
COPE-209ENST00000599964 SERPINB13Q9UIV8 391 aa22.65■■□□□ 1.22
COPE-209ENST00000599964 TBC1D12O60347 775 aa22.64■■□□□ 1.21
COPE-209ENST00000599964 CELF2O95319 508 aaKnown RBP22.64■■□□□ 1.21
COPE-209ENST00000599964 TTLL12Q14166 644 aaPredicted RBP22.64■■□□□ 1.21
COPE-209ENST00000599964 SLC4A8Q2Y0W8 1093 aa22.64■■□□□ 1.21
COPE-209ENST00000599964 CDAN1Q8IWY9 1227 aa22.64■■□□□ 1.21
COPE-209ENST00000599964 MAP4K1Q92918 833 aa22.64■■□□□ 1.21
COPE-209ENST00000599964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.64■■□□□ 1.21
COPE-209ENST00000599964 ZNF287Q9HBT7 754 aa22.64■■□□□ 1.21
COPE-209ENST00000599964 PASKQ96RG2 1323 aa22.63■■□□□ 1.21
COPE-209ENST00000599964 ZNF213O14771 459 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms