RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
SIN3B-210ENST00000599880 HMMRO75330 724 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 MAP3K10Q02779 954 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 PPATQ06203 517 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
SIN3B-210ENST00000599880 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
SIN3B-210ENST00000599880 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
SIN3B-210ENST00000599880 ZCCHC17Q9NP64 241 aaKnown RBP13.38□□□□□ -0.27
SIN3B-210ENST00000599880 RAI14Q9P0K7 980 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 COG6Q9Y2V7 657 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 SIPA1L1O43166 1804 aa13.38□□□□□ -0.27
SIN3B-210ENST00000599880 CCL15-CCL14A0A0B4J2E2 113 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 CETPP11597 493 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 CRHR2Q13324 411 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 CCL15Q16663 113 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 BRI3BPQ8WY22 251 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 R3HDMLQ9H3Y0 253 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 DDX4Q9NQI0 724 aaKnown RBP13.37□□□□□ -0.27
SIN3B-210ENST00000599880 EXOC6BQ9Y2D4 811 aa13.37□□□□□ -0.27
SIN3B-210ENST00000599880 CCDC85CA6NKD9 419 aa13.36□□□□□ -0.27
SIN3B-210ENST00000599880 IRF6O14896 467 aa13.36□□□□□ -0.27
SIN3B-210ENST00000599880 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
SIN3B-210ENST00000599880 INPP5BP32019 993 aa13.36□□□□□ -0.27
SIN3B-210ENST00000599880 SNAPC2Q13487 334 aa13.36□□□□□ -0.27
SIN3B-210ENST00000599880 TMED8Q6PL24 325 aaPredicted RBP13.36□□□□□ -0.27
SIN3B-210ENST00000599880 SH3BP5LQ7L8J4 393 aa13.36□□□□□ -0.27
SIN3B-210ENST00000599880 TLR7Q9NYK1 1049 aaKnown RBP13.36□□□□□ -0.27
SIN3B-210ENST00000599880 MYH1P12882 1939 aa13.36□□□□□ -0.27
SIN3B-210ENST00000599880 MYH7P12883 1935 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-210ENST00000599880 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 TBC1D12O60347 775 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 BAG3O95817 575 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 PLCG2P16885 1265 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 ZAP70P43403 619 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 PICALMQ13492 652 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-210ENST00000599880 FBXO46Q6PJ61 603 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-210ENST00000599880 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-210ENST00000599880 RHPN1Q8TCX5 695 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 NOL10Q9BSC4 688 aaKnown RBP13.35□□□□□ -0.27
SIN3B-210ENST00000599880 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-210ENST00000599880 SNRKQ9NRH2 765 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
SIN3B-210ENST00000599880 HTTP42858 3142 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 RGS19P49795 217 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 PPP4CP60510 307 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 TAF1CQ15572 869 aaPredicted RBP13.34□□□□□ -0.27
SIN3B-210ENST00000599880 AACSQ86V21 672 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 SIRT2Q8IXJ6 389 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 SCYL3Q8IZE3 742 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 OSBPL5Q9H0X9 879 aaPredicted RBP13.34□□□□□ -0.27
SIN3B-210ENST00000599880 ZFYVE28Q9HCC9 887 aa13.34□□□□□ -0.27
SIN3B-210ENST00000599880 RBBP6Q7Z6E9 1792 aaKnown RBP13.34□□□□□ -0.27
SIN3B-210ENST00000599880 LOC285556D6RIA3 1793 aa13.33□□□□□ -0.28
SIN3B-210ENST00000599880 CTNND1O60716 968 aaKnown RBP13.33□□□□□ -0.28
SIN3B-210ENST00000599880 RAB11FIP3O75154 756 aa13.33□□□□□ -0.28
SIN3B-210ENST00000599880 SP3Q02447 781 aa13.33□□□□□ -0.28
SIN3B-210ENST00000599880 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
SIN3B-210ENST00000599880 CLASRPQ8N2M8 674 aaKnown RBP13.33□□□□□ -0.28
SIN3B-210ENST00000599880 DDX60LQ5H9U9 1706 aaKnown RBP13.33□□□□□ -0.28
SIN3B-210ENST00000599880 MGAMO43451 1857 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 NAV1Q8NEY1 1877 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 BTBD19C9JJ37 291 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 CXCL11O14625 94 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 ANKRD23Q86SG2 305 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 ADGRA1Q86SQ6 560 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
SIN3B-210ENST00000599880 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
SIN3B-210ENST00000599880 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 PIH1D3Q9NQM4 214 aaKnown RBP13.32□□□□□ -0.28
SIN3B-210ENST00000599880 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
SIN3B-210ENST00000599880 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
SIN3B-210ENST00000599880 HPS5Q9UPZ3 1129 aa13.32□□□□□ -0.28
SIN3B-210ENST00000599880 TLR2O60603 784 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 PTPRAP18433 802 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 TTF1Q15361 905 aaPredicted RBP13.31□□□□□ -0.28
SIN3B-210ENST00000599880 C20orf194Q5TEA3 1177 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
SIN3B-210ENST00000599880 TRIM17Q9Y577 477 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 ZSWIM8A7E2V4 1837 aa13.31□□□□□ -0.28
SIN3B-210ENST00000599880 IDH1O75874 414 aaKnown RBP13.3□□□□□ -0.28
SIN3B-210ENST00000599880 MAP3K12Q12852 859 aa13.3□□□□□ -0.28
SIN3B-210ENST00000599880 MOGSQ13724 837 aa13.3□□□□□ -0.28
SIN3B-210ENST00000599880 CD99L2Q8TCZ2 262 aa13.3□□□□□ -0.28
SIN3B-210ENST00000599880 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
SIN3B-210ENST00000599880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms