RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 DOCK2Q92608 1830 aa27.6■■■□□ 2.01
CCDC9-204ENST00000599398 RRP1P56182 461 aaKnown RBP27.59■■■□□ 2.01
CCDC9-204ENST00000599398 IFNL1Q8IU54 200 aa27.59■■■□□ 2.01
CCDC9-204ENST00000599398 SNCAIPQ9Y6H5 919 aa27.59■■■□□ 2.01
CCDC9-204ENST00000599398 NDUFB9Q9Y6M9 179 aa27.59■■■□□ 2.01
CCDC9-204ENST00000599398 LAMB1P07942 1786 aa27.58■■■□□ 2.01
CCDC9-204ENST00000599398 ALDH1A1P00352 501 aa27.58■■■□□ 2.01
CCDC9-204ENST00000599398 IDH1O75874 414 aaKnown RBP27.57■■■□□ 2
CCDC9-204ENST00000599398 BAG3O95817 575 aa27.57■■■□□ 2
CCDC9-204ENST00000599398 MAP4K4O95819 1239 aaPredicted RBP27.57■■■□□ 2
CCDC9-204ENST00000599398 INPP5BP32019 993 aa27.57■■■□□ 2
CCDC9-204ENST00000599398 TEX11Q8IYF3 940 aa27.57■■■□□ 2
CCDC9-204ENST00000599398 AATFQ9NY61 560 aaKnown RBP eCLIP27.57■■■□□ 2
CCDC9-204ENST00000599398 DDTLA6NHG4 134 aaPredicted RBP27.56■■■□□ 2
CCDC9-204ENST00000599398 SPDYE5A6NIY4 337 aa27.56■■■□□ 2
CCDC9-204ENST00000599398 IGF2BP3O00425 579 aaKnown RBP eCLIP27.56■■■□□ 2
CCDC9-204ENST00000599398 SH3BP5LQ7L8J4 393 aa27.56■■■□□ 2
CCDC9-204ENST00000599398 ERO1BQ86YB8 467 aa27.56■■■□□ 2
CCDC9-204ENST00000599398 OTUD7BQ6GQQ9 843 aa27.55■■■□□ 2
CCDC9-204ENST00000599398 SH3RF3Q8TEJ3 882 aaPredicted RBP27.55■■■□□ 2
CCDC9-204ENST00000599398 IGSF3O75054 1194 aa27.54■■■□□ 2
CCDC9-204ENST00000599398 GTF2A2P52657 109 aa27.54■■■□□ 2
CCDC9-204ENST00000599398 DGKZQ13574 1117 aa27.54■■■□□ 2
CCDC9-204ENST00000599398 ANTXR1Q9H6X2 564 aa27.54■■■□□ 2
CCDC9-204ENST00000599398 ZNF112Q9UJU3 913 aa27.54■■■□□ 2
CCDC9-204ENST00000599398 NPM3O75607 178 aaKnown RBP27.53■■■□□ 2
CCDC9-204ENST00000599398 PLCG2P16885 1265 aa27.53■■■□□ 2
CCDC9-204ENST00000599398 CYP7A1P22680 504 aa27.53■■■□□ 2
CCDC9-204ENST00000599398 ADGRA1Q86SQ6 560 aa27.53■■■□□ 2
CCDC9-204ENST00000599398 MS4A4AQ96JQ5 239 aa27.53■■■□□ 2
CCDC9-204ENST00000599398 LRRCC1Q9C099 1032 aa27.53■■■□□ 2
CCDC9-204ENST00000599398 ATRNL1Q5VV63 1379 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 CCL15-CCL14A0A0B4J2E2 113 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 TESPA1A2RU30 521 aaPredicted RBP27.52■■■□□ 2
CCDC9-204ENST00000599398 GPR25O00155 361 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 MAP3K12Q12852 859 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 CCL15Q16663 113 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 ZNF296Q8WUU4 475 aaPredicted RBP27.52■■■□□ 2
CCDC9-204ENST00000599398 PTPN18Q99952 460 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 R3HDMLQ9H3Y0 253 aa27.52■■■□□ 2
CCDC9-204ENST00000599398 PPIL2Q13356 520 aa27.51■■□□□ 1.99
CCDC9-204ENST00000599398 MAGEB6Q8N7X4 407 aa27.51■■□□□ 1.99
CCDC9-204ENST00000599398 BRI3BPQ8WY22 251 aa27.51■■□□□ 1.99
CCDC9-204ENST00000599398 ABHD8Q96I13 439 aa27.51■■□□□ 1.99
CCDC9-204ENST00000599398 DNAJC2Q99543 621 aaKnown RBP27.51■■□□□ 1.99
CCDC9-204ENST00000599398 CFHR5Q9BXR6 569 aa27.51■■□□□ 1.99
CCDC9-204ENST00000599398 MCOLN1Q9GZU1 580 aa27.51■■□□□ 1.99
CCDC9-204ENST00000599398 OSBPL5Q9H0X9 879 aaPredicted RBP27.51■■□□□ 1.99
CCDC9-204ENST00000599398 IRF6O14896 467 aa27.5■■□□□ 1.99
CCDC9-204ENST00000599398 PPP4CP60510 307 aa27.5■■□□□ 1.99
CCDC9-204ENST00000599398 PPATQ06203 517 aa27.5■■□□□ 1.99
CCDC9-204ENST00000599398 TTF1Q15361 905 aaPredicted RBP27.5■■□□□ 1.99
CCDC9-204ENST00000599398 SMARCA5O60264 1052 aaPredicted RBP27.49■■□□□ 1.99
CCDC9-204ENST00000599398 SLURP2P0DP57 97 aa27.49■■□□□ 1.99
CCDC9-204ENST00000599398 SNAPC2Q13487 334 aa27.49■■□□□ 1.99
CCDC9-204ENST00000599398 NOL9Q5SY16 702 aaKnown RBP27.49■■□□□ 1.99
CCDC9-204ENST00000599398 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.49■■□□□ 1.99
CCDC9-204ENST00000599398 TGFBRAP1Q8WUH2 860 aa27.49■■□□□ 1.99
CCDC9-204ENST00000599398 CDK5RAP2Q96SN8 1893 aa27.49■■□□□ 1.99
CCDC9-204ENST00000599398 CETPP11597 493 aa27.48■■□□□ 1.99
CCDC9-204ENST00000599398 DYNLL1P63167 89 aaKnown RBP27.48■■□□□ 1.99
CCDC9-204ENST00000599398 MAPKAPK5Q8IW41 473 aa27.48■■□□□ 1.99
CCDC9-204ENST00000599398 MIGA1Q8NAN2 632 aa27.48■■□□□ 1.99
CCDC9-204ENST00000599398 PHF20L1A8MW92 1017 aa27.47■■□□□ 1.99
CCDC9-204ENST00000599398 GOLIM4O00461 696 aa27.47■■□□□ 1.99
CCDC9-204ENST00000599398 MAP3K10Q02779 954 aa27.47■■□□□ 1.99
CCDC9-204ENST00000599398 NOM1Q5C9Z4 860 aaKnown RBP27.47■■□□□ 1.99
CCDC9-204ENST00000599398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.47■■□□□ 1.99
CCDC9-204ENST00000599398 PICK1Q9NRD5 415 aa27.47■■□□□ 1.99
CCDC9-204ENST00000599398 COL2A1P02458 1487 aaPredicted RBP27.46■■□□□ 1.99
CCDC9-204ENST00000599398 FAM196BA6NMK8 535 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 FKTNO75072 461 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 CRHR2Q13324 411 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 CTU1Q7Z7A3 348 aaKnown RBP27.46■■□□□ 1.99
CCDC9-204ENST00000599398 SCYL3Q8IZE3 742 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 CRBNQ96SW2 442 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 BOLA2Q9H3K6 86 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 DCTPP1Q9H773 170 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 PCDHB15Q9Y5E8 787 aa27.46■■□□□ 1.99
CCDC9-204ENST00000599398 FAM43AQ8N2R8 423 aa27.45■■□□□ 1.98
CCDC9-204ENST00000599398 FOCADQ5VW36 1801 aa27.45■■□□□ 1.98
CCDC9-204ENST00000599398 FLT1P17948 1338 aa27.44■■□□□ 1.98
CCDC9-204ENST00000599398 TBC1D12O60347 775 aa27.44■■□□□ 1.98
CCDC9-204ENST00000599398 ATP5JP18859 108 aa27.44■■□□□ 1.98
CCDC9-204ENST00000599398 TAF1CQ15572 869 aaPredicted RBP27.44■■□□□ 1.98
CCDC9-204ENST00000599398 TMED8Q6PL24 325 aaPredicted RBP27.44■■□□□ 1.98
CCDC9-204ENST00000599398 DHX36Q9H2U1 1008 aaKnown RBP27.44■■□□□ 1.98
CCDC9-204ENST00000599398 DOCK1Q14185 1865 aa27.43■■□□□ 1.98
CCDC9-204ENST00000599398 CTNND1O60716 968 aaKnown RBP27.43■■□□□ 1.98
CCDC9-204ENST00000599398 SLC9C2Q5TAH2 1124 aa27.43■■□□□ 1.98
CCDC9-204ENST00000599398 CERS3Q8IU89 383 aa27.43■■□□□ 1.98
CCDC9-204ENST00000599398 EDC3Q96F86 508 aaKnown RBP27.43■■□□□ 1.98
CCDC9-204ENST00000599398 PAG1Q9NWQ8 432 aa27.43■■□□□ 1.98
CCDC9-204ENST00000599398 USP5P45974 858 aa27.42■■□□□ 1.98
CCDC9-204ENST00000599398 ZFYVE28Q9HCC9 887 aa27.42■■□□□ 1.98
CCDC9-204ENST00000599398 PI4KBQ9UBF8 816 aa27.42■■□□□ 1.98
CCDC9-204ENST00000599398 ZHX2Q9Y6X8 837 aa27.42■■□□□ 1.98
CCDC9-204ENST00000599398 CCDC85CA6NKD9 419 aa27.41■■□□□ 1.98
CCDC9-204ENST00000599398 BTBD19C9JJ37 291 aa27.41■■□□□ 1.98
CCDC9-204ENST00000599398 PDE6AP16499 860 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms