RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 DISC1Q9NRI5 854 aa10.55□□□□□ -0.72
LINC00343-208ENST00000599264 C1GALT1Q9NS00 363 aa10.55□□□□□ -0.72
LINC00343-208ENST00000599264 FAM8A1Q9UBU6 413 aa10.55□□□□□ -0.72
LINC00343-208ENST00000599264 OAS3Q9Y6K5 1087 aaKnown RBP10.55□□□□□ -0.72
LINC00343-208ENST00000599264 LDHBP07195 334 aaKnown RBP10.54□□□□□ -0.72
LINC00343-208ENST00000599264 LRRC14Q15048 493 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 MCTP1Q6DN14 999 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 ZNF765Q7L2R6 523 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 VSIG10LQ86VR7 867 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 C12orf49Q9H741 205 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 LRRC4CQ9HCJ2 640 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 SSU72Q9NP77 194 aaKnown RBP10.54□□□□□ -0.72
LINC00343-208ENST00000599264 BSDC1Q9NW68 430 aaPredicted RBP10.54□□□□□ -0.72
LINC00343-208ENST00000599264 PCOLCE2Q9UKZ9 415 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 PCDHGC5Q9Y5F6 944 aa10.54□□□□□ -0.72
LINC00343-208ENST00000599264 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
LINC00343-208ENST00000599264 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
LINC00343-208ENST00000599264 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
LINC00343-208ENST00000599264 TTLL4Q14679 1199 aa10.53□□□□□ -0.72
LINC00343-208ENST00000599264 STK35Q8TDR2 534 aa10.53□□□□□ -0.72
LINC00343-208ENST00000599264 SETDB2Q96T68 719 aa10.53□□□□□ -0.72
LINC00343-208ENST00000599264 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
LINC00343-208ENST00000599264 PRNPP04156 253 aa10.52□□□□□ -0.73
LINC00343-208ENST00000599264 P4HBP07237 508 aaKnown RBP10.52□□□□□ -0.73
LINC00343-208ENST00000599264 ERVK-24P63145 666 aa10.52□□□□□ -0.73
LINC00343-208ENST00000599264 ZNF252P-AS1Q0IIN9 211 aa10.52□□□□□ -0.73
LINC00343-208ENST00000599264 GPBAR1Q8TDU6 330 aa10.52□□□□□ -0.73
LINC00343-208ENST00000599264 FBXL18Q96ME1 805 aa10.52□□□□□ -0.73
LINC00343-208ENST00000599264 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
LINC00343-208ENST00000599264 ENC1O14682 589 aa10.51□□□□□ -0.73
LINC00343-208ENST00000599264 ADAMTS4O75173 837 aa10.51□□□□□ -0.73
LINC00343-208ENST00000599264 HCLS1P14317 486 aaPredicted RBP10.51□□□□□ -0.73
LINC00343-208ENST00000599264 ZC3H12AQ5D1E8 599 aaKnown RBP10.51□□□□□ -0.73
LINC00343-208ENST00000599264 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
LINC00343-208ENST00000599264 CCDC39Q9UFE4 941 aa10.51□□□□□ -0.73
LINC00343-208ENST00000599264 TRIM37O94972 964 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 COL19A1Q14993 1142 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 SCARA3Q6AZY7 606 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 RNF214Q8ND24 703 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 KRTAP4-8Q9BYQ9 185 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 PICK1Q9NRD5 415 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 CYP8B1Q9UNU6 501 aa10.5□□□□□ -0.73
LINC00343-208ENST00000599264 USP17L7P0C7H9 530 aa10.49□□□□□ -0.73
LINC00343-208ENST00000599264 BMP6P22004 513 aa10.49□□□□□ -0.73
LINC00343-208ENST00000599264 PRPF40AO75400 957 aaKnown RBP10.48□□□□□ -0.73
LINC00343-208ENST00000599264 FBXO24O75426 580 aa10.48□□□□□ -0.73
LINC00343-208ENST00000599264 FAM87AP0C7U9 286 aa10.48□□□□□ -0.73
LINC00343-208ENST00000599264 EIF4BP23588 611 aaKnown RBP10.48□□□□□ -0.73
LINC00343-208ENST00000599264 GNA15P30679 374 aa10.48□□□□□ -0.73
LINC00343-208ENST00000599264 CDK5R2Q13319 367 aa10.48□□□□□ -0.73
LINC00343-208ENST00000599264 SND1Q7KZF4 910 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00343-208ENST00000599264 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00343-208ENST00000599264 ZC3H7BQ9UGR2 993 aaKnown RBP10.48□□□□□ -0.73
LINC00343-208ENST00000599264 PAX4O43316 350 aa10.47□□□□□ -0.73
LINC00343-208ENST00000599264 TP53INP2Q8IXH6 220 aa10.47□□□□□ -0.73
LINC00343-208ENST00000599264 CACNA2D2Q9NY47 1150 aa10.47□□□□□ -0.73
LINC00343-208ENST00000599264 TTF2Q9UNY4 1162 aaKnown RBP10.47□□□□□ -0.73
LINC00343-208ENST00000599264 PAGE1O75459 146 aa10.46□□□□□ -0.73
LINC00343-208ENST00000599264 EAPPQ56P03 285 aaPredicted RBP10.46□□□□□ -0.73
LINC00343-208ENST00000599264 SV2BQ7L1I2 683 aa10.46□□□□□ -0.73
LINC00343-208ENST00000599264 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
LINC00343-208ENST00000599264 AGBL5Q8NDL9 886 aa10.46□□□□□ -0.73
LINC00343-208ENST00000599264 GRIN3AQ8TCU5 1115 aa10.46□□□□□ -0.73
LINC00343-208ENST00000599264 ISL2Q96A47 359 aa10.46□□□□□ -0.73
LINC00343-208ENST00000599264 ARHGAP27Q6ZUM4 889 aa10.45□□□□□ -0.74
LINC00343-208ENST00000599264 FLCNQ8NFG4 579 aa10.45□□□□□ -0.74
LINC00343-208ENST00000599264 PCDHA4Q9UN74 947 aa10.45□□□□□ -0.74
LINC00343-208ENST00000599264 RIMBP3CA6NJZ7 1639 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 RIMBP3BA6NNM3 1639 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 RIMBP3Q9UFD9 1639 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 ANKRD33BA6NCL7 494 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 NEFMP07197 916 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 TAL1P17542 331 aaPredicted RBP10.44□□□□□ -0.74
LINC00343-208ENST00000599264 PCNX4Q63HM2 1172 aa10.44□□□□□ -0.74
LINC00343-208ENST00000599264 FANCGO15287 622 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 CDC37L1Q7L3B6 337 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 KCT2Q8NC54 265 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 ELMO3Q96BJ8 720 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 MISP3Q96FF7 219 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 SLC5A6Q9Y289 635 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 CSADQ9Y600 493 aa10.43□□□□□ -0.74
LINC00343-208ENST00000599264 DCDC2CA8MYV0 355 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 CELA3AP09093 270 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 LMNB1P20700 586 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 PPM1JQ5JR12 505 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 MPRIPQ6WCQ1 1025 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 ABI1Q8IZP0 508 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 NETO1Q8TDF5 533 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 DUSP23Q9BVJ7 150 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 MKNK2Q9HBH9 465 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 AK5Q9Y6K8 562 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 WDR62O43379 1518 aa10.42□□□□□ -0.74
LINC00343-208ENST00000599264 BAZ1BQ9UIG0 1483 aaKnown RBP10.42□□□□□ -0.74
LINC00343-208ENST00000599264 ADGRE2Q9UHX3 823 aa10.41□□□□□ -0.74
LINC00343-208ENST00000599264 C12orf40Q86WS4 652 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms