RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 EGFRP00533 1210 aa13.93□□□□□ -0.18
PDE4C-210ENST00000597297 APPP05067 770 aa13.93□□□□□ -0.18
PDE4C-210ENST00000597297 RBM26Q5T8P6 1007 aaKnown RBP13.93□□□□□ -0.18
PDE4C-210ENST00000597297 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
PDE4C-210ENST00000597297 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
PDE4C-210ENST00000597297 SMC1BQ8NDV3 1235 aa13.93□□□□□ -0.18
PDE4C-210ENST00000597297 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
PDE4C-210ENST00000597297 FSTL1Q12841 308 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
PDE4C-210ENST00000597297 TBC1D10BQ4KMP7 808 aaPredicted RBP13.92□□□□□ -0.18
PDE4C-210ENST00000597297 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 LDHDQ86WU2 507 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 TRPM4Q8TD43 1214 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 EPB41L4AQ9HCS5 686 aaPredicted RBP13.92□□□□□ -0.18
PDE4C-210ENST00000597297 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
PDE4C-210ENST00000597297 BRD1O95696 1058 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 FGD1P98174 961 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
PDE4C-210ENST00000597297 ADGRA1Q86SQ6 560 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 IFNL3Q8IZI9 196 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 CERS5Q8N5B7 392 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 NECAB1Q8N987 351 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 MIGA1Q8NAN2 632 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 BRF1Q92994 677 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 LRRC2Q9BYS8 371 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 AGXT2Q9BYV1 514 aa13.92□□□□□ -0.18
PDE4C-210ENST00000597297 ZNF646O15015 1829 aaPredicted RBP13.91□□□□□ -0.18
PDE4C-210ENST00000597297 MAGEB6P1A0A0J9YX57 407 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 GSG1L2A8MUP6 293 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 USP17L8P0C7I0 530 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 MAP1SQ66K74 1059 aaPredicted RBP13.91□□□□□ -0.18
PDE4C-210ENST00000597297 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
PDE4C-210ENST00000597297 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
PDE4C-210ENST00000597297 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 NACAP1Q9BZK3 213 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 NAPBQ9H115 298 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
PDE4C-210ENST00000597297 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
PDE4C-210ENST00000597297 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 PRKAB2O43741 272 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 IGSF3O75054 1194 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
PDE4C-210ENST00000597297 PTMSP20962 102 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 GJB2P29033 226 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 ZNF280AP59817 542 aaPredicted RBP13.9□□□□□ -0.18
PDE4C-210ENST00000597297 SPTY2D1Q68D10 685 aaPredicted RBP13.9□□□□□ -0.18
PDE4C-210ENST00000597297 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
PDE4C-210ENST00000597297 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 FBXL16Q8N461 479 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 ZNF384Q8TF68 577 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 GTF3C6Q969F1 213 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
PDE4C-210ENST00000597297 PGAP2Q9UHJ9 254 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.18
PDE4C-210ENST00000597297 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.18
PDE4C-210ENST00000597297 BAZ2AQ9UIF9 1905 aaKnown RBP13.89□□□□□ -0.19
PDE4C-210ENST00000597297 LAMB1P07942 1786 aa13.89□□□□□ -0.19
PDE4C-210ENST00000597297 MCM5P33992 734 aa13.89□□□□□ -0.19
PDE4C-210ENST00000597297 MECOMQ03112 1051 aa13.89□□□□□ -0.19
PDE4C-210ENST00000597297 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
PDE4C-210ENST00000597297 RIOK1Q9BRS2 568 aaKnown RBP13.89□□□□□ -0.19
PDE4C-210ENST00000597297 ADAMTSL1Q8N6G6 1762 aa13.89□□□□□ -0.19
PDE4C-210ENST00000597297 F8W031 263 aaPredicted RBP13.88□□□□□ -0.19
PDE4C-210ENST00000597297 GOLGA6L22H0YM25 854 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 PRC1O43663 620 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 TDO2P48775 406 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 FMR1Q06787 632 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDE4C-210ENST00000597297 APOBRQ0VD83 1088 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 TRDNQ13061 729 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 STK3Q13188 491 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 GRIK5Q16478 980 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 MYOZ2Q9NPC6 264 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 PFKFB2O60825 505 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 HSPA6P17066 643 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 SYT1P21579 422 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 PRDX5P30044 214 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 ANTXR2P58335 489 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
PDE4C-210ENST00000597297 KIF4BQ2VIQ3 1234 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
PDE4C-210ENST00000597297 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
PDE4C-210ENST00000597297 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
PDE4C-210ENST00000597297 ASTN2O75129 1339 aaPredicted RBP13.87□□□□□ -0.19
PDE4C-210ENST00000597297 MYH2Q9UKX2 1941 aa13.87□□□□□ -0.19
PDE4C-210ENST00000597297 STX6O43752 255 aa13.87□□□□□ -0.19
PDE4C-210ENST00000597297 DYNLL1P63167 89 aaKnown RBP13.87□□□□□ -0.19
PDE4C-210ENST00000597297 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
PDE4C-210ENST00000597297 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
PDE4C-210ENST00000597297 ZNF274Q96GC6 653 aaPredicted RBP13.87□□□□□ -0.19
PDE4C-210ENST00000597297 PCDHAC2Q9Y5I4 1007 aa13.87□□□□□ -0.19
PDE4C-210ENST00000597297 LDHBP07195 334 aaKnown RBP13.86□□□□□ -0.19
PDE4C-210ENST00000597297 EVCP57679 992 aa13.86□□□□□ -0.19
PDE4C-210ENST00000597297 CTDSPL2Q05D32 466 aa13.86□□□□□ -0.19
PDE4C-210ENST00000597297 SCRN1Q12765 414 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms