RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 GPAA1O43292 621 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 CELF2O95319 508 aaKnown RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 NF2P35240 595 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 C1QTNF8P60827 252 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 SUPT20HL1Q3ZLR7 823 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 NBPF12Q5TAG4 269 aaPredicted RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 MAPKAPK5Q8IW41 473 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 ZFPM1Q8IX07 1006 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 STRBPQ96SI9 672 aaKnown RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 SEC62Q99442 399 aaKnown RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 DIAPH3Q9NSV4 1193 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 BAZ2AQ9UIF9 1905 aaKnown RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 FLT1P17948 1338 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 ATRNL1Q5VV63 1379 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 A0A0D9SFI3 127 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 GNAT2P19087 354 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 USP5P45974 858 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 APLP1P51693 650 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 NMIQ13287 307 aaPredicted RBP10.04□□□□□ -0.8
VRK3-211ENST00000596445 MCMDC2Q4G0Z9 681 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 CST9Q5W186 159 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 HOOK2Q96ED9 719 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
VRK3-211ENST00000596445 DHX36Q9H2U1 1008 aaKnown RBP10.04□□□□□ -0.8
VRK3-211ENST00000596445 ZNF408Q9H9D4 720 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 ATP8A2Q9NTI2 1148 aa10.04□□□□□ -0.8
VRK3-211ENST00000596445 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
VRK3-211ENST00000596445 DDX60LQ5H9U9 1706 aaKnown RBP10.04□□□□□ -0.8
VRK3-211ENST00000596445 SSC5DA1L4H1 1573 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 DDTLA6NHG4 134 aaPredicted RBP10.03□□□□□ -0.8
VRK3-211ENST00000596445 TMEM88BA6NKF7 163 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 PRKAB2O43741 272 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 PPP1R12BO60237 982 aaPredicted RBP10.03□□□□□ -0.8
VRK3-211ENST00000596445 CHMLP26374 656 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 MFAP1P55081 439 aaKnown RBP10.03□□□□□ -0.8
VRK3-211ENST00000596445 FKBP1BP68106 108 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 GIMAP6Q6P9H5 292 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
VRK3-211ENST00000596445 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 C2orf69Q8N8R5 385 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 SDR42E1Q8WUS8 393 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 DDRGK1Q96HY6 314 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 CSRNP1Q96S65 589 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 GBA2Q9HCG7 927 aaPredicted RBP10.03□□□□□ -0.8
VRK3-211ENST00000596445 DCP1AQ9NPI6 582 aaPredicted RBP10.03□□□□□ -0.8
VRK3-211ENST00000596445 SLC4A4Q9Y6R1 1079 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 PAPPA2Q9BXP8 1791 aa10.03□□□□□ -0.8
VRK3-211ENST00000596445 GSG1L2A8MUP6 293 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 PATL2C9JE40 543 aaKnown RBP10.02□□□□□ -0.81
VRK3-211ENST00000596445 DCAF15Q66K64 600 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 CWC27Q6UX04 472 aaKnown RBP10.02□□□□□ -0.81
VRK3-211ENST00000596445 CCDC129Q6ZRS4 1044 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 RUFY2Q8WXA3 655 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 PI4KBQ9UBF8 816 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
VRK3-211ENST00000596445 PALD1Q9ULE6 856 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 PCNTO95613 3336 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 SIPA1L1O43166 1804 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
VRK3-211ENST00000596445 TBC1D12O60347 775 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 USP2O75604 605 aaPredicted RBP10.01□□□□□ -0.81
VRK3-211ENST00000596445 POLR3DP05423 398 aaPredicted RBP10.01□□□□□ -0.81
VRK3-211ENST00000596445 HLA-DOAP06340 250 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 HSPA6P17066 643 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 MAP3K10Q02779 954 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
VRK3-211ENST00000596445 MAP3K11Q16584 847 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 ARMC9Q7Z3E5 817 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 TTC6Q86TZ1 520 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
VRK3-211ENST00000596445 NACAP1Q9BZK3 213 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 RAD50Q92878 1312 aa10.01□□□□□ -0.81
VRK3-211ENST00000596445 USP17L12C9JPN9 530 aa10□□□□□ -0.81
VRK3-211ENST00000596445 USP17L21D6R901 530 aa10□□□□□ -0.81
VRK3-211ENST00000596445 APPP05067 770 aa10□□□□□ -0.81
VRK3-211ENST00000596445 IREB2P48200 963 aaKnown RBP10□□□□□ -0.81
VRK3-211ENST00000596445 PRKG1Q13976 671 aa10□□□□□ -0.81
VRK3-211ENST00000596445 ALX1Q15699 326 aa10□□□□□ -0.81
VRK3-211ENST00000596445 VPS53Q5VIR6 699 aa10□□□□□ -0.81
VRK3-211ENST00000596445 MIGA2Q7L4E1 593 aa10□□□□□ -0.81
VRK3-211ENST00000596445 SAPCD2Q86UD0 394 aa10□□□□□ -0.81
VRK3-211ENST00000596445 METTL16Q86W50 562 aaKnown RBP10□□□□□ -0.81
VRK3-211ENST00000596445 FOXP4Q8IVH2 680 aaPredicted RBP10□□□□□ -0.81
VRK3-211ENST00000596445 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
VRK3-211ENST00000596445 IFNL3Q8IZI9 196 aa10□□□□□ -0.81
VRK3-211ENST00000596445 ZNF341Q9BYN7 854 aa10□□□□□ -0.81
VRK3-211ENST00000596445 EHD4Q9H223 541 aa10□□□□□ -0.81
VRK3-211ENST00000596445 HERC5Q9UII4 1024 aaKnown RBP10□□□□□ -0.81
VRK3-211ENST00000596445 ANGEL1Q9UNK9 670 aaKnown RBP10□□□□□ -0.81
VRK3-211ENST00000596445 TLL2Q9Y6L7 1015 aa10□□□□□ -0.81
VRK3-211ENST00000596445 OTOFQ9HC10 1997 aa10□□□□□ -0.81
VRK3-211ENST00000596445 LAMB1P07942 1786 aa10□□□□□ -0.81
VRK3-211ENST00000596445 MYH8P13535 1937 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 UNCXA6NJT0 531 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 UBE2Q2LH0YL09 131 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms