RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	NEXN	Q0ZGT2	675 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	ANKLE1	Q8NAG6	615 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	PXYLP1	Q8TE99	480 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	LARP6	Q9BRS8	491 aa	Known RBP	10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	UBE2O	Q9C0C9	1292 aa	Known RBP	10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	PAK6	Q9NQU5	681 aa	Predicted RBP	10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	GABRQ	Q9UN88	632 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	JAG2	Q9Y219	1238 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	PCDHGA4	Q9Y5G9	962 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	AK9	Q5TCS8	1911 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	DOCK3	Q8IZD9	2030 aa		10.87	□□□□□ -0.67
LINC00649-208	ENST00000596365	TTC28	Q96AY4	2481 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	SNAP23	O00161	211 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	IGKV5-2	P06315	115 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	BCR	P11274	1271 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	ELN	P15502	786 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	IRF5	Q13568	498 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	MFSD14B	Q5SR56	506 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	UBE3B	Q7Z3V4	1068 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	PARK7	Q99497	189 aa	Known RBP	10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	PLA2G12B	Q9BX93	195 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	CHMP4A	Q9BY43	222 aa		10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365	DDX60L	Q5H9U9	1706 aa	Known RBP	10.86	□□□□□ -0.67
LINC00649-208	ENST00000596365		H7C1W4	665 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	TAF5L	O75529	589 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	SYN1	P17600	705 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	CRK	P46108	304 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	FLT3LG	P49771	235 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	PPP1R15B	Q5SWA1	713 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	DCAF15	Q66K64	600 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	KSR2	Q6VAB6	950 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	DIS3L	Q8TF46	1054 aa	Known RBP	10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	GUCD1	Q96NT3	240 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	MBIP	Q9NS73	344 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	KCNH4	Q9UQ05	1017 aa		10.85	□□□□□ -0.67
LINC00649-208	ENST00000596365	ANKRD18B	A2A2Z9	1011 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	PI4KAP2	A4QPH2	592 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	NEURL1B	A8MQ27	555 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	CSF1R	P07333	972 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	COL9A1	P20849	921 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	FAM83A	Q86UY5	434 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	PI4KAP1	Q8N8J0	262 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	CCER1	Q8TC90	406 aa	Predicted RBP	10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	PTCD2	Q8WV60	388 aa	Known RBP	10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	ZNF341	Q9BYN7	854 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	NBPF3	Q9H094	633 aa		10.84	□□□□□ -0.67
LINC00649-208	ENST00000596365	MOGS	Q13724	837 aa		10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	CWF19L2	Q2TBE0	894 aa	Known RBP	10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	CCDC30	Q5VVM6	783 aa		10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	SYMPK	Q92797	1274 aa	Known RBP	10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	TMOD2	Q9NZR1	351 aa		10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	DNAH12	Q6ZR08	3092 aa		10.83	□□□□□ -0.68
LINC00649-208	ENST00000596365	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	ELL2	O00472	640 aa	Predicted RBP	10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	TNPO2	O14787	897 aa	Known RBP	10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	NUDT7	P0C024	238 aa		10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	CYP2C8	P10632	490 aa		10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	HDLBP	Q00341	1268 aa	Known RBP	10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	FKBP1C	Q5VVH2	108 aa		10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	CCDC146	Q8IYE0	955 aa		10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	TDRD7	Q8NHU6	1098 aa	Known RBP	10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	DDX27	Q96GQ7	796 aa	Known RBP	10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	C11orf49	Q9H6J7	331 aa		10.82	□□□□□ -0.68
LINC00649-208	ENST00000596365	COL2A1	P02458	1487 aa	Predicted RBP	10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	ZNF853	P0CG23	659 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	INPP5B	P32019	993 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	CACNB3	P54284	484 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	IFIT5	Q13325	482 aa	Known RBP	10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	MFSD10	Q14728	455 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	VARS2	Q5ST30	1063 aa	Known RBP	10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	ZNF697	Q5TEC3	545 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	GPAT2	Q6NUI2	795 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	TEKT1	Q969V4	418 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	COA7	Q96BR5	231 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	RUNDC1	Q96C34	613 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	FAM161B	Q96MY7	647 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	MUC3A	Q02505	3323 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	PTPRF	P10586	1907 aa		10.81	□□□□□ -0.68
LINC00649-208	ENST00000596365	CXCL11	O14625	94 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	PLIN1	O60240	522 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	HIBADH	P31937	336 aa	Known RBP	10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	CASP7	P55210	303 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	GCKR	Q14397	625 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	MIGA2	Q7L4E1	593 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	FASTKD5	Q7L8L6	764 aa	Known RBP	10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	MAFA	Q8NHW3	353 aa	Predicted RBP	10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	MYH16	Q9H6N6	1097 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	ZNF112	Q9UJU3	913 aa		10.8	□□□□□ -0.68
LINC00649-208	ENST00000596365	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	HMGCR	P04035	888 aa		10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	GNAI1	P63096	354 aa		10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	NOL9	Q5SY16	702 aa	Known RBP	10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	ZDHHC15	Q96MV8	337 aa		10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	HMX1	Q9NP08	348 aa	Predicted RBP	10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	IFT57	Q9NWB7	429 aa		10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	SLC45A1	Q9Y2W3	748 aa		10.79	□□□□□ -0.68
LINC00649-208	ENST00000596365	CACNA1F	O60840	1977 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms