RNA–Protein interactions for RNA: ENST00000595690.1

SPTBN4-208, Transcript of spectrin beta, non-erythrocytic 4, human

TSL 2

Gene SPTBN4, Length 763 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTBN4-208	ENST00000595690	BICC1	Q9H694	974 aa	Known RBP	13.73	□□□□□ -0.21
SPTBN4-208	ENST00000595690	DOCK3	Q8IZD9	2030 aa		13.73	□□□□□ -0.21
SPTBN4-208	ENST00000595690	FRAT2	O75474	233 aa	Predicted RBP	13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	TFRC	P02786	760 aa	Known RBP	13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	DIXDC1	Q155Q3	683 aa		13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	SRCIN1	Q9C0H9	1055 aa		13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	SLC45A1	Q9Y2W3	748 aa		13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	AFG3L2	Q9Y4W6	797 aa		13.72	□□□□□ -0.21
SPTBN4-208	ENST00000595690	PTPRF	P10586	1907 aa		13.71	□□□□□ -0.21
SPTBN4-208	ENST00000595690	PTPRA	P18433	802 aa		13.71	□□□□□ -0.21
SPTBN4-208	ENST00000595690		Q7L0L9	218 aa		13.71	□□□□□ -0.21
SPTBN4-208	ENST00000595690	KLHDC4	Q8TBB5	520 aa		13.71	□□□□□ -0.21
SPTBN4-208	ENST00000595690	RFX7	Q2KHR2	1363 aa		13.71	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TNPO2	O14787	897 aa	Known RBP	13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SLURP2	P0DP57	97 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	MAP3K10	Q02779	954 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	LRIT3	Q3SXY7	679 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SH3BP5L	Q7L8J4	393 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SCYL3	Q8IZE3	742 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	DEFB123	Q8N688	67 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	STXBP5L	Q9Y2K9	1186 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	ZHX2	Q9Y6X8	837 aa		13.7	□□□□□ -0.22
SPTBN4-208	ENST00000595690	PHIP	Q8WWQ0	1821 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	PRDX5	P30044	214 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	PUM3	Q15397	648 aa	Known RBP	13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SLC4A10	Q6U841	1118 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	FASTKD5	Q7L8L6	764 aa	Known RBP	13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	NECAB2	Q7Z6G3	386 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	WDR63	Q8IWG1	891 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	WDR66	Q8TBY9	1149 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	MTMR10	Q9NXD2	777 aa		13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.69	□□□□□ -0.22
SPTBN4-208	ENST00000595690	C7orf61	Q8IZ16	206 aa		13.68	□□□□□ -0.22
SPTBN4-208	ENST00000595690	USP40	Q9NVE5	1235 aa		13.68	□□□□□ -0.22
SPTBN4-208	ENST00000595690	DOCK2	Q92608	1830 aa		13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TTC28	Q96AY4	2481 aa		13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	AK9	Q5TCS8	1911 aa		13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	IFIT1	P09914	478 aa	Known RBP	13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	MAGEA10	P43363	369 aa	Predicted RBP	13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	RFX5	P48382	616 aa	Predicted RBP	13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	GADL1	Q6ZQY3	521 aa		13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	ANKLE1	Q8NAG6	615 aa		13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	IDI2	Q9BXS1	227 aa		13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.67	□□□□□ -0.22
SPTBN4-208	ENST00000595690	MYH13	Q9UKX3	1938 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	RGS3	P49796	1198 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TRIM32	Q13049	653 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TREML2	Q5T2D2	321 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	CCDC84	Q86UT8	332 aa	Predicted RBP	13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	ANKRD13C	Q8N6S4	541 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	PICK1	Q9NRD5	415 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	GJD2	Q9UKL4	321 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	AGTPBP1	Q9UPW5	1226 aa		13.66	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SALL1	Q9NSC2	1324 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	DOCK1	Q14185	1865 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	DDX60L	Q5H9U9	1706 aa	Known RBP	13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	DDTL	A6NHG4	134 aa	Predicted RBP	13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TRIM75P	A6NK02	468 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	ENTPD3	O75355	529 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	SYN1	P17600	705 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	FAM110C	Q1W6H9	321 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	ATG9A	Q7Z3C6	839 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TDH	Q8IZJ6	230 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	LPIN2	Q92539	896 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	COA7	Q96BR5	231 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	DDX4	Q9NQI0	724 aa	Known RBP	13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	TAOK2	Q9UL54	1235 aa		13.65	□□□□□ -0.22
SPTBN4-208	ENST00000595690	GAK	O14976	1311 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	PFAS	O15067	1338 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	EYA2	O00167	538 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	CTNND1	O60716	968 aa	Known RBP	13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	HMGCR	P04035	888 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	LDHB	P07195	334 aa	Known RBP	13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	SLC5A1	P13866	664 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	NBPF3	Q9H094	633 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	OGDHL	Q9ULD0	1010 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	PLXNB2	O15031	1838 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	RPTOR	Q8N122	1335 aa		13.64	□□□□□ -0.23
SPTBN4-208	ENST00000595690	ZBTB22	O15209	634 aa		13.63	□□□□□ -0.23
SPTBN4-208	ENST00000595690	MAP3K21	Q5TCX8	1036 aa		13.63	□□□□□ -0.23
SPTBN4-208	ENST00000595690	USP44	Q9H0E7	712 aa		13.63	□□□□□ -0.23
SPTBN4-208	ENST00000595690	SALL2	Q9Y467	1007 aa	Predicted RBP	13.63	□□□□□ -0.23
SPTBN4-208	ENST00000595690	LOC285556	D6RIA3	1793 aa		13.63	□□□□□ -0.23
SPTBN4-208	ENST00000595690	COL2A1	P02458	1487 aa	Predicted RBP	13.62	□□□□□ -0.23
SPTBN4-208	ENST00000595690	COL6A1	P12109	1028 aa		13.62	□□□□□ -0.23
SPTBN4-208	ENST00000595690	TRIB2	Q92519	343 aa		13.62	□□□□□ -0.23
SPTBN4-208	ENST00000595690	C11orf49	Q9H6J7	331 aa		13.62	□□□□□ -0.23
SPTBN4-208	ENST00000595690	HMX1	Q9NP08	348 aa	Predicted RBP	13.62	□□□□□ -0.23
SPTBN4-208	ENST00000595690	LRRFIP2	Q9Y608	721 aa	Known RBP	13.62	□□□□□ -0.23
SPTBN4-208	ENST00000595690	MYH2	Q9UKX2	1941 aa		13.61	□□□□□ -0.23
SPTBN4-208	ENST00000595690	ZEB1	P37275	1124 aa	Predicted RBP	13.61	□□□□□ -0.23
SPTBN4-208	ENST00000595690	PHKA1	P46020	1223 aa		13.61	□□□□□ -0.23
SPTBN4-208	ENST00000595690	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.61	□□□□□ -0.23
SPTBN4-208	ENST00000595690	FAM163A	Q96GL9	167 aa	Predicted RBP	13.61	□□□□□ -0.23
SPTBN4-208	ENST00000595690	GUCD1	Q96NT3	240 aa		13.61	□□□□□ -0.23
SPTBN4-208	ENST00000595690	UBE2O	Q9C0C9	1292 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms