RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 ERO1BQ86YB8 467 aa19.64■□□□□ 0.73
IRF3-210ENST00000595240 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
IRF3-210ENST00000595240 DDX4Q9NQI0 724 aaKnown RBP19.64■□□□□ 0.73
IRF3-210ENST00000595240 NPM3O75607 178 aaKnown RBP19.63■□□□□ 0.73
IRF3-210ENST00000595240 INPP5BP32019 993 aa19.63■□□□□ 0.73
IRF3-210ENST00000595240 ZAP70P43403 619 aa19.63■□□□□ 0.73
IRF3-210ENST00000595240 GTF2A2P52657 109 aa19.63■□□□□ 0.73
IRF3-210ENST00000595240 OTUD7BQ6GQQ9 843 aa19.63■□□□□ 0.73
IRF3-210ENST00000595240 RHPN1Q8TCX5 695 aa19.63■□□□□ 0.73
IRF3-210ENST00000595240 BRI3BPQ8WY22 251 aa19.63■□□□□ 0.73
IRF3-210ENST00000595240 IGSF3O75054 1194 aa19.62■□□□□ 0.73
IRF3-210ENST00000595240 CTU1Q7Z7A3 348 aaKnown RBP19.62■□□□□ 0.73
IRF3-210ENST00000595240 AACSQ86V21 672 aa19.62■□□□□ 0.73
IRF3-210ENST00000595240 DDTLA6NHG4 134 aaPredicted RBP19.61■□□□□ 0.73
IRF3-210ENST00000595240 MAP3K10Q02779 954 aa19.61■□□□□ 0.73
IRF3-210ENST00000595240 PPIL2Q13356 520 aa19.61■□□□□ 0.73
IRF3-210ENST00000595240 PICALMQ13492 652 aa19.61■□□□□ 0.73
IRF3-210ENST00000595240 NOL9Q5SY16 702 aaKnown RBP19.61■□□□□ 0.73
IRF3-210ENST00000595240 NAA16Q6N069 864 aaPredicted RBP19.61■□□□□ 0.73
IRF3-210ENST00000595240 ZSCAN29Q8IWY8 852 aaPredicted RBP19.61■□□□□ 0.73
IRF3-210ENST00000595240 IL1RAPL2Q9NP60 686 aa19.61■□□□□ 0.73
IRF3-210ENST00000595240 PIH1D3Q9NQM4 214 aaKnown RBP19.61■□□□□ 0.73
IRF3-210ENST00000595240 CCL15-CCL14A0A0B4J2E2 113 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 IRF6O14896 467 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 FKTNO75072 461 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 PPATQ06203 517 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 CCL15Q16663 113 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 KIF1BPQ96EK5 621 aa19.6■□□□□ 0.73
IRF3-210ENST00000595240 CRHR2Q13324 411 aa19.59■□□□□ 0.73
IRF3-210ENST00000595240 CCDC85CA6NKD9 419 aa19.58■□□□□ 0.72
IRF3-210ENST00000595240 RAB11FIP3O75154 756 aa19.58■□□□□ 0.72
IRF3-210ENST00000595240 CETPP11597 493 aa19.58■□□□□ 0.72
IRF3-210ENST00000595240 PPP4CP60510 307 aa19.58■□□□□ 0.72
IRF3-210ENST00000595240 SNAPC2Q13487 334 aa19.58■□□□□ 0.72
IRF3-210ENST00000595240 ADGRA1Q86SQ6 560 aa19.58■□□□□ 0.72
IRF3-210ENST00000595240 CLASRPQ8N2M8 674 aaKnown RBP19.58■□□□□ 0.72
IRF3-210ENST00000595240 SH3RF3Q8TEJ3 882 aaPredicted RBP19.58■□□□□ 0.72
IRF3-210ENST00000595240 COL2A1P02458 1487 aaPredicted RBP19.58■□□□□ 0.72
IRF3-210ENST00000595240 APBB1O00213 710 aa19.57■□□□□ 0.72
IRF3-210ENST00000595240 BAG3O95817 575 aa19.57■□□□□ 0.72
IRF3-210ENST00000595240 PKN2Q16513 984 aaKnown RBP19.57■□□□□ 0.72
IRF3-210ENST00000595240 TEX11Q8IYF3 940 aa19.57■□□□□ 0.72
IRF3-210ENST00000595240 FAM43AQ8N2R8 423 aa19.57■□□□□ 0.72
IRF3-210ENST00000595240 NOL10Q9BSC4 688 aaKnown RBP19.57■□□□□ 0.72
IRF3-210ENST00000595240 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
IRF3-210ENST00000595240 AATFQ9NY61 560 aaKnown RBP eCLIP19.57■□□□□ 0.72
IRF3-210ENST00000595240 TBC1D12O60347 775 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 SLURP2P0DP57 97 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 PLCG2P16885 1265 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 SCYL3Q8IZE3 742 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 ZCCHC17Q9NP64 241 aaKnown RBP19.56■□□□□ 0.72
IRF3-210ENST00000595240 KCNH4Q9UQ05 1017 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 NDUFB9Q9Y6M9 179 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 MAST2Q6P0Q8 1798 aa19.56■□□□□ 0.72
IRF3-210ENST00000595240 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
IRF3-210ENST00000595240 IDH1O75874 414 aaKnown RBP19.55■□□□□ 0.72
IRF3-210ENST00000595240 ANTXR1Q9H6X2 564 aa19.55■□□□□ 0.72
IRF3-210ENST00000595240 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
IRF3-210ENST00000595240 IFIT2P09913 472 aaKnown RBP19.54■□□□□ 0.72
IRF3-210ENST00000595240 CYP7A1P22680 504 aa19.54■□□□□ 0.72
IRF3-210ENST00000595240 TAF1CQ15572 869 aaPredicted RBP19.54■□□□□ 0.72
IRF3-210ENST00000595240 TMED8Q6PL24 325 aaPredicted RBP19.54■□□□□ 0.72
IRF3-210ENST00000595240 AK9Q5TCS8 1911 aa19.53■□□□□ 0.72
IRF3-210ENST00000595240 CTNND1O60716 968 aaKnown RBP19.53■□□□□ 0.72
IRF3-210ENST00000595240 PTPRAP18433 802 aa19.53■□□□□ 0.72
IRF3-210ENST00000595240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
IRF3-210ENST00000595240 ZFYVE28Q9HCC9 887 aa19.53■□□□□ 0.72
IRF3-210ENST00000595240 PICK1Q9NRD5 415 aa19.53■□□□□ 0.72
IRF3-210ENST00000595240 CXCL11O14625 94 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 MAP3K12Q12852 859 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 MOGSQ13724 837 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 MAGEB6Q8N7X4 407 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 TGFBRAP1Q8WUH2 860 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 ERO1AQ96HE7 468 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.52■□□□□ 0.72
IRF3-210ENST00000595240 HPS5Q9UPZ3 1129 aa19.52■□□□□ 0.72
IRF3-210ENST00000595240 FLT1P17948 1338 aa19.51■□□□□ 0.71
IRF3-210ENST00000595240 FAM196BA6NMK8 535 aa19.51■□□□□ 0.71
IRF3-210ENST00000595240 SP3Q02447 781 aa19.51■□□□□ 0.71
IRF3-210ENST00000595240 TTF1Q15361 905 aaPredicted RBP19.51■□□□□ 0.71
IRF3-210ENST00000595240 FBXO46Q6PJ61 603 aaPredicted RBP19.51■□□□□ 0.71
IRF3-210ENST00000595240 ANKRD23Q86SG2 305 aa19.51■□□□□ 0.71
IRF3-210ENST00000595240 DHX36Q9H2U1 1008 aaKnown RBP19.51■□□□□ 0.71
IRF3-210ENST00000595240 PI4KBQ9UBF8 816 aa19.51■□□□□ 0.71
IRF3-210ENST00000595240 ZHX2Q9Y6X8 837 aa19.51■□□□□ 0.71
IRF3-210ENST00000595240 DYNLL1P63167 89 aaKnown RBP19.5■□□□□ 0.71
IRF3-210ENST00000595240 OTOP1Q7RTM1 612 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 CERS3Q8IU89 383 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 MAPKAPK5Q8IW41 473 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 MIGA1Q8NAN2 632 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 CD99L2Q8TCZ2 262 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 LRRCC1Q9C099 1032 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 HERC5Q9UII4 1024 aaKnown RBP19.5■□□□□ 0.71
IRF3-210ENST00000595240 AFG3L2Q9Y4W6 797 aa19.5■□□□□ 0.71
IRF3-210ENST00000595240 TLR2O60603 784 aa19.49■□□□□ 0.71
IRF3-210ENST00000595240 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
IRF3-210ENST00000595240 BCL11AQ9H165 835 aa19.49■□□□□ 0.71
IRF3-210ENST00000595240 TRIM17Q9Y577 477 aa19.49■□□□□ 0.71
IRF3-210ENST00000595240 MYO5AQ9Y4I1 1855 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms