RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 IFNL1Q8IU54 200 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 OTUD5Q96G74 571 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 R3HDMLQ9H3Y0 253 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 SNCAIPQ9Y6H5 919 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 RFX7Q2KHR2 1363 aa18.03■□□□□ 0.48
USE1-205ENST00000594724 IGF2BP3O00425 579 aaKnown RBP eCLIP18.02■□□□□ 0.48
USE1-205ENST00000594724 ADGRA1Q86SQ6 560 aa18.02■□□□□ 0.48
USE1-205ENST00000594724 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
USE1-205ENST00000594724 MS4A4AQ96JQ5 239 aa18.02■□□□□ 0.48
USE1-205ENST00000594724 AATFQ9NY61 560 aaKnown RBP eCLIP18.02■□□□□ 0.48
USE1-205ENST00000594724 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
USE1-205ENST00000594724 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
USE1-205ENST00000594724 PTPN18Q99952 460 aa18.01■□□□□ 0.47
USE1-205ENST00000594724 NOL10Q9BSC4 688 aaKnown RBP18.01■□□□□ 0.47
USE1-205ENST00000594724 ZNF112Q9UJU3 913 aa18.01■□□□□ 0.47
USE1-205ENST00000594724 AK9Q5TCS8 1911 aa18.01■□□□□ 0.47
USE1-205ENST00000594724 SPDYE5A6NIY4 337 aa18■□□□□ 0.47
USE1-205ENST00000594724 CYP7A1P22680 504 aa18■□□□□ 0.47
USE1-205ENST00000594724 ERO1BQ86YB8 467 aa18■□□□□ 0.47
USE1-205ENST00000594724 TEX11Q8IYF3 940 aa18■□□□□ 0.47
USE1-205ENST00000594724 MYO5AQ9Y4I1 1855 aaKnown RBP17.99■□□□□ 0.47
USE1-205ENST00000594724 TESPA1A2RU30 521 aaPredicted RBP17.99■□□□□ 0.47
USE1-205ENST00000594724 BAG3O95817 575 aa17.99■□□□□ 0.47
USE1-205ENST00000594724 MAP4K4O95819 1239 aaPredicted RBP17.99■□□□□ 0.47
USE1-205ENST00000594724 ALDH1A1P00352 501 aa17.99■□□□□ 0.47
USE1-205ENST00000594724 PPP4CP60510 307 aa17.99■□□□□ 0.47
USE1-205ENST00000594724 DGKZQ13574 1117 aa17.99■□□□□ 0.47
USE1-205ENST00000594724 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
USE1-205ENST00000594724 ATRNL1Q5VV63 1379 aa17.99■□□□□ 0.47
USE1-205ENST00000594724 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 PHF20L1A8MW92 1017 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 GPR25O00155 361 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 IRF6O14896 467 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 NPM3O75607 178 aaKnown RBP17.98■□□□□ 0.47
USE1-205ENST00000594724 GTF2A2P52657 109 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 DYNLL1P63167 89 aaKnown RBP17.98■□□□□ 0.47
USE1-205ENST00000594724 MAP3K10Q02779 954 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 CCL15Q16663 113 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 ZNF296Q8WUU4 475 aaPredicted RBP17.98■□□□□ 0.47
USE1-205ENST00000594724 BRI3BPQ8WY22 251 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 DNAJC2Q99543 621 aaKnown RBP17.98■□□□□ 0.47
USE1-205ENST00000594724 MCOLN1Q9GZU1 580 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 OSBPL5Q9H0X9 879 aaPredicted RBP17.98■□□□□ 0.47
USE1-205ENST00000594724 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
USE1-205ENST00000594724 IGSF3O75054 1194 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 PLCG2P16885 1265 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 MIGA1Q8NAN2 632 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 TGFBRAP1Q8WUH2 860 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 CFHR5Q9BXR6 569 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 DCTPP1Q9H773 170 aa17.97■□□□□ 0.47
USE1-205ENST00000594724 FAM196BA6NMK8 535 aa17.96■□□□□ 0.47
USE1-205ENST00000594724 GOLIM4O00461 696 aa17.96■□□□□ 0.47
USE1-205ENST00000594724 PPATQ06203 517 aa17.96■□□□□ 0.47
USE1-205ENST00000594724 PPIL2Q13356 520 aa17.96■□□□□ 0.47
USE1-205ENST00000594724 NOL9Q5SY16 702 aaKnown RBP17.96■□□□□ 0.47
USE1-205ENST00000594724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.96■□□□□ 0.47
USE1-205ENST00000594724 EDC3Q96F86 508 aaKnown RBP17.96■□□□□ 0.47
USE1-205ENST00000594724 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
USE1-205ENST00000594724 MAST2Q6P0Q8 1798 aa17.95■□□□□ 0.46
USE1-205ENST00000594724 CRHR2Q13324 411 aa17.95■□□□□ 0.46
USE1-205ENST00000594724 TTF1Q15361 905 aaPredicted RBP17.95■□□□□ 0.46
USE1-205ENST00000594724 MAPKAPK5Q8IW41 473 aa17.95■□□□□ 0.46
USE1-205ENST00000594724 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
USE1-205ENST00000594724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.46
USE1-205ENST00000594724 DOCK2Q92608 1830 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 FKTNO75072 461 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 CETPP11597 493 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 ATP5JP18859 108 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 SNAPC2Q13487 334 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 SCYL3Q8IZE3 742 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 LAMB1P07942 1786 aa17.94■□□□□ 0.46
USE1-205ENST00000594724 TBC1D12O60347 775 aa17.93■□□□□ 0.46
USE1-205ENST00000594724 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
USE1-205ENST00000594724 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
USE1-205ENST00000594724 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
USE1-205ENST00000594724 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.93■□□□□ 0.46
USE1-205ENST00000594724 SAP30BPQ9UHR5 308 aaKnown RBP17.93■□□□□ 0.46
USE1-205ENST00000594724 FLT1P17948 1338 aa17.93■□□□□ 0.46
USE1-205ENST00000594724 BTBD19C9JJ37 291 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 CTNND1O60716 968 aaKnown RBP17.92■□□□□ 0.46
USE1-205ENST00000594724 PDE6AP16499 860 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 PTPRAP18433 802 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 TAF1CQ15572 869 aaPredicted RBP17.92■□□□□ 0.46
USE1-205ENST00000594724 PICK1Q9NRD5 415 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 PAG1Q9NWQ8 432 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 KCNH4Q9UQ05 1017 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 ZHX2Q9Y6X8 837 aa17.92■□□□□ 0.46
USE1-205ENST00000594724 COL2A1P02458 1487 aaPredicted RBP17.91■□□□□ 0.46
USE1-205ENST00000594724 RRP1BQ14684 758 aaKnown RBP17.91■□□□□ 0.46
USE1-205ENST00000594724 SLC4A8Q2Y0W8 1093 aa17.91■□□□□ 0.46
USE1-205ENST00000594724 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
USE1-205ENST00000594724 HAUS7Q99871 368 aa17.91■□□□□ 0.46
USE1-205ENST00000594724 DHX36Q9H2U1 1008 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms