RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
VRK3-207ENST00000594092 SBK1Q52WX2 424 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 CHST3Q7LGC8 479 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 CDK5RAP2Q96SN8 1893 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 MCM5P33992 734 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 ANTXR2P58335 489 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 RSBN1LQ6PCB5 846 aaPredicted RBP17.95■□□□□ 0.46
VRK3-207ENST00000594092 MFSD6Q6ZSS7 791 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 ANP32EQ9BTT0 268 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 AGXT2Q9BYV1 514 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 ARPP21Q9UBL0 812 aaPredicted RBP17.95■□□□□ 0.46
VRK3-207ENST00000594092 TPCN1Q9ULQ1 816 aa17.95■□□□□ 0.46
VRK3-207ENST00000594092 CIZ1Q9ULV3 898 aaPredicted RBP17.95■□□□□ 0.46
VRK3-207ENST00000594092 B4E1Z4 1266 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 LARGE1O95461 756 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 USP17L8P0C7I0 530 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 DDIT3P35638 169 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 RASSF7Q02833 373 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 APOBEC3HQ6NTF7 200 aaKnown RBP17.94■□□□□ 0.46
VRK3-207ENST00000594092 MAPKAPK5Q8IW41 473 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 ZSCAN31Q96LW9 406 aaPredicted RBP17.94■□□□□ 0.46
VRK3-207ENST00000594092 ZDHHC15Q96MV8 337 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
VRK3-207ENST00000594092 CNNM2Q9H8M5 875 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 MYO3BQ8WXR4 1341 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 LAMB1P07942 1786 aa17.94■□□□□ 0.46
VRK3-207ENST00000594092 PRC1O43663 620 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 CYP2D6P10635 497 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 EVX2Q03828 476 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 STK11IPQ8N1F8 1099 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 NAV1Q8NEY1 1877 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 JDP2Q8WYK2 163 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 GMLQ99445 158 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 SH2B1Q9NRF2 756 aaPredicted RBP17.93■□□□□ 0.46
VRK3-207ENST00000594092 SERPINA10Q9UK55 444 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 PRELPP51888 382 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 FGD1P98174 961 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 ME3Q16798 604 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 FBXL16Q8N461 479 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 BRF1Q92994 677 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 SYT17Q9BSW7 474 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 KRT23Q9C075 422 aa17.93■□□□□ 0.46
VRK3-207ENST00000594092 FLT1P17948 1338 aa17.92■□□□□ 0.46
VRK3-207ENST00000594092 CXCL9Q07325 125 aa17.92■□□□□ 0.46
VRK3-207ENST00000594092 C12orf60Q5U649 245 aa17.92■□□□□ 0.46
VRK3-207ENST00000594092 CDC42EP5Q6NZY7 148 aa17.92■□□□□ 0.46
VRK3-207ENST00000594092 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
VRK3-207ENST00000594092 USP40Q9NVE5 1235 aa17.92■□□□□ 0.46
VRK3-207ENST00000594092 PCDHAC2Q9Y5I4 1007 aa17.92■□□□□ 0.46
VRK3-207ENST00000594092 FGRP09769 529 aa17.91■□□□□ 0.46
VRK3-207ENST00000594092 INTS4Q96HW7 963 aaKnown RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
VRK3-207ENST00000594092 FOCADQ5VW36 1801 aa17.91■□□□□ 0.46
VRK3-207ENST00000594092 DDX60LQ5H9U9 1706 aaKnown RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 KDM4AO75164 1064 aa17.91■□□□□ 0.46
VRK3-207ENST00000594092 WDHD1O75717 1129 aaPredicted RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 RBM5P52756 815 aaKnown RBP eCLIP17.91■□□□□ 0.46
VRK3-207ENST00000594092 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 ZSWIM5Q9P217 1185 aa17.91■□□□□ 0.46
VRK3-207ENST00000594092 SAP30BPQ9UHR5 308 aaKnown RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 ZBTB12Q9Y330 459 aaPredicted RBP17.91■□□□□ 0.46
VRK3-207ENST00000594092 PCP11498 1178 aaKnown RBP17.9■□□□□ 0.46
VRK3-207ENST00000594092 APOBRQ0VD83 1088 aa17.9■□□□□ 0.46
VRK3-207ENST00000594092 NBR1Q14596 966 aa17.9■□□□□ 0.46
VRK3-207ENST00000594092 SLC4A8Q2Y0W8 1093 aa17.9■□□□□ 0.46
VRK3-207ENST00000594092 CIAPIN1Q6FI81 312 aa17.9■□□□□ 0.46
VRK3-207ENST00000594092 AGBL3Q8NEM8 1001 aa17.9■□□□□ 0.46
VRK3-207ENST00000594092 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.9■□□□□ 0.46
VRK3-207ENST00000594092 ROBO3Q96MS0 1386 aa17.89■□□□□ 0.45
VRK3-207ENST00000594092 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
VRK3-207ENST00000594092 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
VRK3-207ENST00000594092 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
VRK3-207ENST00000594092 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
VRK3-207ENST00000594092 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
VRK3-207ENST00000594092 AMOTL1Q8IY63 956 aa17.89■□□□□ 0.45
VRK3-207ENST00000594092 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
VRK3-207ENST00000594092 DDX4Q9NQI0 724 aaKnown RBP17.89■□□□□ 0.45
VRK3-207ENST00000594092 ECM29Q5VYK3 1845 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 SH2B2O14492 632 aaPredicted RBP17.88■□□□□ 0.45
VRK3-207ENST00000594092 ORC4O43929 436 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 PRDM1O75626 825 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 PLCD1P51178 756 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 EVCP57679 992 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 PICALMQ13492 652 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 TNIP1Q15025 636 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 IGDCC4Q8TDY8 1250 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 ESR2Q92731 530 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 TMEM87BQ96K49 555 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 HDAC9Q9UKV0 1011 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 MYH1P12882 1939 aa17.88■□□□□ 0.45
VRK3-207ENST00000594092 FZD9O00144 591 aa17.87■□□□□ 0.45
VRK3-207ENST00000594092 PDE4BQ07343 736 aa17.87■□□□□ 0.45
VRK3-207ENST00000594092 STK3Q13188 491 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms