RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CNNM2Q9H8M5 875 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 SH2B1Q9NRF2 756 aaPredicted RBP24.6■■□□□ 1.53
PNKP-203ENST00000593946 ARPP21Q9UBL0 812 aaPredicted RBP24.6■■□□□ 1.53
PNKP-203ENST00000593946 TPCN1Q9ULQ1 816 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 MINDY4BA8MYZ0 360 aa24.59■■□□□ 1.53
PNKP-203ENST00000593946 MFSD6Q6ZSS7 791 aa24.59■■□□□ 1.53
PNKP-203ENST00000593946 LRRC2Q9BYS8 371 aa24.59■■□□□ 1.53
PNKP-203ENST00000593946 FOXD4L1Q9NU39 408 aa24.59■■□□□ 1.53
PNKP-203ENST00000593946 ZNRF3Q9ULT6 936 aa24.59■■□□□ 1.53
PNKP-203ENST00000593946 LARGE1O95461 756 aa24.58■■□□□ 1.53
PNKP-203ENST00000593946 ANTXR2P58335 489 aa24.58■■□□□ 1.53
PNKP-203ENST00000593946 TEX11Q8IYF3 940 aa24.58■■□□□ 1.53
PNKP-203ENST00000593946 TGFBRAP1Q8WUH2 860 aa24.58■■□□□ 1.53
PNKP-203ENST00000593946 INTS4Q96HW7 963 aaKnown RBP24.58■■□□□ 1.53
PNKP-203ENST00000593946 FHDC1Q9C0D6 1143 aaPredicted RBP24.58■■□□□ 1.53
PNKP-203ENST00000593946 RNF41Q9H4P4 317 aaPredicted RBP24.58■■□□□ 1.53
PNKP-203ENST00000593946 MYO3BQ8WXR4 1341 aa24.58■■□□□ 1.53
PNKP-203ENST00000593946 CYP2D7A0A087X1C5 515 aa24.58■■□□□ 1.52
PNKP-203ENST00000593946 VIL1P09327 827 aaKnown RBP24.58■■□□□ 1.52
PNKP-203ENST00000593946 CRKP46108 304 aa24.58■■□□□ 1.52
PNKP-203ENST00000593946 CHST3Q7LGC8 479 aa24.58■■□□□ 1.52
PNKP-203ENST00000593946 NKX2-3Q8TAU0 364 aa24.58■■□□□ 1.52
PNKP-203ENST00000593946 ZDHHC15Q96MV8 337 aa24.58■■□□□ 1.52
PNKP-203ENST00000593946 INCENPQ9NQS7 918 aa24.58■■□□□ 1.52
PNKP-203ENST00000593946 B4E1Z4 1266 aa24.57■■□□□ 1.52
PNKP-203ENST00000593946 PRC1O43663 620 aa24.57■■□□□ 1.52
PNKP-203ENST00000593946 ME3Q16798 604 aa24.57■■□□□ 1.52
PNKP-203ENST00000593946 KRT23Q9C075 422 aa24.57■■□□□ 1.52
PNKP-203ENST00000593946 MCM9Q9NXL9 1143 aa24.57■■□□□ 1.52
PNKP-203ENST00000593946 SMIM22K7EJ46 135 aa24.56■■□□□ 1.52
PNKP-203ENST00000593946 PSMD14O00487 310 aa24.56■■□□□ 1.52
PNKP-203ENST00000593946 RAD17O75943 681 aa24.56■■□□□ 1.52
PNKP-203ENST00000593946 FGD1P98174 961 aa24.56■■□□□ 1.52
PNKP-203ENST00000593946 APOBEC3HQ6NTF7 200 aaKnown RBP24.56■■□□□ 1.52
PNKP-203ENST00000593946 RSBN1LQ6PCB5 846 aaPredicted RBP24.56■■□□□ 1.52
PNKP-203ENST00000593946 BRF1Q92994 677 aa24.56■■□□□ 1.52
PNKP-203ENST00000593946 SERPINA10Q9UK55 444 aa24.56■■□□□ 1.52
PNKP-203ENST00000593946 FGRP09769 529 aa24.55■■□□□ 1.52
PNKP-203ENST00000593946 USP17L8P0C7I0 530 aa24.55■■□□□ 1.52
PNKP-203ENST00000593946 PCP11498 1178 aaKnown RBP24.55■■□□□ 1.52
PNKP-203ENST00000593946 CYB5R4Q7L1T6 521 aa24.55■■□□□ 1.52
PNKP-203ENST00000593946 FLT1P17948 1338 aa24.55■■□□□ 1.52
PNKP-203ENST00000593946 MAPKAPK5Q8IW41 473 aa24.55■■□□□ 1.52
PNKP-203ENST00000593946 GMLQ99445 158 aa24.55■■□□□ 1.52
PNKP-203ENST00000593946 DICER1Q9UPY3 1922 aaKnown RBP24.55■■□□□ 1.52
PNKP-203ENST00000593946 ROBO3Q96MS0 1386 aa24.54■■□□□ 1.52
PNKP-203ENST00000593946 CYP2D6P10635 497 aa24.54■■□□□ 1.52
PNKP-203ENST00000593946 C12orf60Q5U649 245 aa24.54■■□□□ 1.52
PNKP-203ENST00000593946 JDP2Q8WYK2 163 aa24.54■■□□□ 1.52
PNKP-203ENST00000593946 CWC22Q9HCG8 908 aaKnown RBP24.54■■□□□ 1.52
PNKP-203ENST00000593946 CIZ1Q9ULV3 898 aaPredicted RBP24.54■■□□□ 1.52
PNKP-203ENST00000593946 KDM4AO75164 1064 aa24.53■■□□□ 1.52
PNKP-203ENST00000593946 RASSF7Q02833 373 aa24.53■■□□□ 1.52
PNKP-203ENST00000593946 EVX2Q03828 476 aa24.53■■□□□ 1.52
PNKP-203ENST00000593946 CHMP5Q9NZZ3 219 aa24.53■■□□□ 1.52
PNKP-203ENST00000593946 ZSWIM5Q9P217 1185 aa24.53■■□□□ 1.52
PNKP-203ENST00000593946 EVCP57679 992 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 ST3GAL1Q11201 340 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 CDC42EP5Q6NZY7 148 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.52■■□□□ 1.52
PNKP-203ENST00000593946 SBF1O95248 1867 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 WDHD1O75717 1129 aaPredicted RBP24.52■■□□□ 1.52
PNKP-203ENST00000593946 CXCL9Q07325 125 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 AMOTL1Q8IY63 956 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 STK11IPQ8N1F8 1099 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 TMEM87BQ96K49 555 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 GPHNQ9NQX3 736 aaPredicted RBP24.52■■□□□ 1.52
PNKP-203ENST00000593946 USP40Q9NVE5 1235 aa24.52■■□□□ 1.52
PNKP-203ENST00000593946 SLC3A2P08195 630 aaKnown RBP24.51■■□□□ 1.51
PNKP-203ENST00000593946 PRELPP51888 382 aa24.51■■□□□ 1.51
PNKP-203ENST00000593946 APOBRQ0VD83 1088 aa24.51■■□□□ 1.51
PNKP-203ENST00000593946 RRP12Q5JTH9 1297 aaKnown RBP24.51■■□□□ 1.51
PNKP-203ENST00000593946 TOMM22Q9NS69 142 aa24.51■■□□□ 1.51
PNKP-203ENST00000593946 ORC4O43929 436 aa24.5■■□□□ 1.51
PNKP-203ENST00000593946 CCDC83Q8IWF9 413 aa24.5■■□□□ 1.51
PNKP-203ENST00000593946 ESR2Q92731 530 aa24.5■■□□□ 1.51
PNKP-203ENST00000593946 MTA3Q9BTC8 594 aa24.5■■□□□ 1.51
PNKP-203ENST00000593946 ANGEL1Q9UNK9 670 aaKnown RBP24.5■■□□□ 1.51
PNKP-203ENST00000593946 PCDHAC2Q9Y5I4 1007 aa24.5■■□□□ 1.51
PNKP-203ENST00000593946 SH2B2O14492 632 aaPredicted RBP24.49■■□□□ 1.51
PNKP-203ENST00000593946 NECAB1Q8N987 351 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 AGBL3Q8NEM8 1001 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 IGDCC4Q8TDY8 1250 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 SYT17Q9BSW7 474 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 SAP30BPQ9UHR5 308 aaKnown RBP24.49■■□□□ 1.51
PNKP-203ENST00000593946 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.49■■□□□ 1.51
PNKP-203ENST00000593946 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 MYH8P13535 1937 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 RBM5P52756 815 aaKnown RBP eCLIP24.49■■□□□ 1.51
PNKP-203ENST00000593946 CIAPIN1Q6FI81 312 aa24.49■■□□□ 1.51
PNKP-203ENST00000593946 ZNF274Q96GC6 653 aaPredicted RBP24.49■■□□□ 1.51
PNKP-203ENST00000593946 DDX4Q9NQI0 724 aaKnown RBP24.49■■□□□ 1.51
PNKP-203ENST00000593946 POLR3DP05423 398 aaPredicted RBP24.48■■□□□ 1.51
PNKP-203ENST00000593946 PLCD1P51178 756 aa24.48■■□□□ 1.51
PNKP-203ENST00000593946 PDE4BQ07343 736 aa24.48■■□□□ 1.51
PNKP-203ENST00000593946 SLC4A8Q2Y0W8 1093 aa24.48■■□□□ 1.51
PNKP-203ENST00000593946 GTF3C6Q969F1 213 aa24.48■■□□□ 1.51
PNKP-203ENST00000593946 ZBTB12Q9Y330 459 aaPredicted RBP24.48■■□□□ 1.51
PNKP-203ENST00000593946 PFKFB2O60825 505 aa24.47■■□□□ 1.51
PNKP-203ENST00000593946 STK3Q13188 491 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms