RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 DNM1LO00429 736 aa15.26■□□□□ 0.03
ZNF558-202ENST00000593891 GCLCP48506 637 aaPredicted RBP15.26■□□□□ 0.03
ZNF558-202ENST00000593891 MICALL1Q8N3F8 863 aa15.26■□□□□ 0.03
ZNF558-202ENST00000593891 HERVK_113Q902F9 699 aa15.26■□□□□ 0.03
ZNF558-202ENST00000593891 MYD88Q99836 296 aa15.26■□□□□ 0.03
ZNF558-202ENST00000593891 HYPKQ9NX55 129 aa15.26■□□□□ 0.03
ZNF558-202ENST00000593891 TRIM43BA6NCK2 446 aa15.25■□□□□ 0.03
ZNF558-202ENST00000593891 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
ZNF558-202ENST00000593891 SLC39A5Q6ZMH5 540 aa15.25■□□□□ 0.03
ZNF558-202ENST00000593891 TRIM43Q96BQ3 446 aaPredicted RBP15.25■□□□□ 0.03
ZNF558-202ENST00000593891 PDLIM7Q9NR12 457 aa15.25■□□□□ 0.03
ZNF558-202ENST00000593891 PICK1Q9NRD5 415 aa15.25■□□□□ 0.03
ZNF558-202ENST00000593891 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
ZNF558-202ENST00000593891 TLL1O43897 1013 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 EPHB4P54760 987 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 CHRNDQ07001 517 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 HDGFL1Q5TGJ6 251 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 SH3RF1Q7Z6J0 888 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 LTBP2Q14767 1821 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 ZDBF2Q9HCK1 2354 aa15.24■□□□□ 0.03
ZNF558-202ENST00000593891 MSCO60682 206 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 FPGSQ05932 587 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 NFE2L2Q16236 605 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 TRIM60Q495X7 471 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 LPAR1Q92633 364 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 PBX4Q9BYU1 374 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 MAST2Q6P0Q8 1798 aa15.23■□□□□ 0.03
ZNF558-202ENST00000593891 SNAP23O00161 211 aa15.22■□□□□ 0.03
ZNF558-202ENST00000593891 PER1O15534 1290 aaPredicted RBP15.22■□□□□ 0.03
ZNF558-202ENST00000593891 PBX2P40425 430 aa15.22■□□□□ 0.03
ZNF558-202ENST00000593891 HDLBPQ00341 1268 aaKnown RBP15.22■□□□□ 0.03
ZNF558-202ENST00000593891 COG5Q9UP83 839 aa15.22■□□□□ 0.03
ZNF558-202ENST00000593891 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
ZNF558-202ENST00000593891 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
ZNF558-202ENST00000593891 MYBBP1AQ9BQG0 1328 aaKnown RBP15.21■□□□□ 0.03
ZNF558-202ENST00000593891 TAF5LO75529 589 aa15.21■□□□□ 0.03
ZNF558-202ENST00000593891 HSPA5P11021 654 aaKnown RBP15.21■□□□□ 0.03
ZNF558-202ENST00000593891 RAG1P15918 1043 aa15.21■□□□□ 0.03
ZNF558-202ENST00000593891 ARRDC4Q8NCT1 418 aa15.21■□□□□ 0.03
ZNF558-202ENST00000593891 TEKT1Q969V4 418 aa15.21■□□□□ 0.03
ZNF558-202ENST00000593891 DDX20Q9UHI6 824 aaKnown RBP15.21■□□□□ 0.03
ZNF558-202ENST00000593891 MSRAQ9UJ68 235 aa15.21■□□□□ 0.03
ZNF558-202ENST00000593891 CACNA1GO43497 2377 aa15.21■□□□□ 0.03
ZNF558-202ENST00000593891 PTPRAP18433 802 aa15.2■□□□□ 0.02
ZNF558-202ENST00000593891 RAB30Q15771 203 aa15.2■□□□□ 0.02
ZNF558-202ENST00000593891 SCYL3Q8IZE3 742 aa15.2■□□□□ 0.02
ZNF558-202ENST00000593891 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 KBTBD13C9JR72 458 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 ALADP13716 330 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 ITGA6P23229 1130 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 CNGA1P29973 690 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 RGS2P41220 211 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
ZNF558-202ENST00000593891 SNX17Q15036 470 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 FAM151AQ8WW52 585 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 DNAH12Q6ZR08 3092 aa15.19■□□□□ 0.02
ZNF558-202ENST00000593891 TRIM75PA6NK02 468 aa15.18■□□□□ 0.02
ZNF558-202ENST00000593891 ITGB8P26012 769 aa15.18■□□□□ 0.02
ZNF558-202ENST00000593891 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
ZNF558-202ENST00000593891 MFSD14CQ5VZR4 134 aa15.18■□□□□ 0.02
ZNF558-202ENST00000593891 CCDC174Q6PII3 467 aa15.18■□□□□ 0.02
ZNF558-202ENST00000593891 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
ZNF558-202ENST00000593891 GRXCR1A8MXD5 290 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 TLE2Q04725 743 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 CCL14Q16627 93 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 TREML2Q5T2D2 321 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 C1orf53Q5VUE5 145 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 ERMP1Q7Z2K6 904 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
ZNF558-202ENST00000593891 XIRP2A4UGR9 3374 aa15.16■□□□□ 0.02
ZNF558-202ENST00000593891 CLTBP09497 229 aa15.16■□□□□ 0.02
ZNF558-202ENST00000593891 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
ZNF558-202ENST00000593891 PHOX2BQ99453 314 aa15.16■□□□□ 0.02
ZNF558-202ENST00000593891 MRIQ9BWK5 157 aa15.16■□□□□ 0.02
ZNF558-202ENST00000593891 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
ZNF558-202ENST00000593891 MORF4L1Q9UBU8 362 aa15.16■□□□□ 0.02
ZNF558-202ENST00000593891 KIAA0355O15063 1070 aa15.15■□□□□ 0.02
ZNF558-202ENST00000593891 HOXB7P09629 217 aa15.15■□□□□ 0.02
ZNF558-202ENST00000593891 MAPK4P31152 587 aa15.15■□□□□ 0.02
ZNF558-202ENST00000593891 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
ZNF558-202ENST00000593891 PROCA1Q8NCQ7 364 aaPredicted RBP15.15■□□□□ 0.02
ZNF558-202ENST00000593891 APBA2Q99767 749 aa15.15■□□□□ 0.02
ZNF558-202ENST00000593891 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.02
ZNF558-202ENST00000593891 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
ZNF558-202ENST00000593891 CD320Q9NPF0 282 aa15.15■□□□□ 0.02
ZNF558-202ENST00000593891 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
ZNF558-202ENST00000593891 TCP10Q12799 353 aa15.14■□□□□ 0.01
ZNF558-202ENST00000593891 USP6NLQ92738 828 aa15.14■□□□□ 0.01
ZNF558-202ENST00000593891 HLA-CQ95604 372 aa15.14■□□□□ 0.01
ZNF558-202ENST00000593891 NKX2-4Q9H2Z4 354 aa15.14■□□□□ 0.01
ZNF558-202ENST00000593891 DAGLAQ9Y4D2 1042 aa15.14■□□□□ 0.01
ZNF558-202ENST00000593891 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
ZNF558-202ENST00000593891 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
ZNF558-202ENST00000593891 HIBADHP31937 336 aaKnown RBP15.13■□□□□ 0.01
ZNF558-202ENST00000593891 GJD3Q8N144 294 aa15.13■□□□□ 0.01
ZNF558-202ENST00000593891 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms