RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 ICMTO60725 284 aa9.16□□□□□ -0.94
SOX2-OT-219ENST00000593330 AFMP43652 599 aa9.16□□□□□ -0.94
SOX2-OT-219ENST00000593330 ZNF211Q13398 564 aaPredicted RBP9.16□□□□□ -0.94
SOX2-OT-219ENST00000593330 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.16□□□□□ -0.94
SOX2-OT-219ENST00000593330 TNKS2Q9H2K2 1166 aa9.16□□□□□ -0.94
SOX2-OT-219ENST00000593330 IGF2BP3O00425 579 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX2-OT-219ENST00000593330 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-219ENST00000593330 MESP2Q0VG99 397 aa9.15□□□□□ -0.94
SOX2-OT-219ENST00000593330 GLYCTKQ8IVS8 523 aa9.15□□□□□ -0.94
SOX2-OT-219ENST00000593330 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.94
SOX2-OT-219ENST00000593330 ZNF862O60290 1169 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 TSPAN15O95858 294 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 HCLS1P14317 486 aaPredicted RBP9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 IKZF1Q13422 519 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 USPL1Q5W0Q7 1092 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 EMILIN2Q9BXX0 1053 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 PCDHGC5Q9Y5F6 944 aa9.14□□□□□ -0.95
SOX2-OT-219ENST00000593330 ITIH2P19823 946 aa9.13□□□□□ -0.95
SOX2-OT-219ENST00000593330 ERVK-24P63145 666 aa9.13□□□□□ -0.95
SOX2-OT-219ENST00000593330 RNF214Q8ND24 703 aa9.13□□□□□ -0.95
SOX2-OT-219ENST00000593330 CCDC74AQ96AQ1 378 aa9.13□□□□□ -0.95
SOX2-OT-219ENST00000593330 WDR89Q96FK6 387 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-219ENST00000593330 ZC3H12CQ9C0D7 883 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-219ENST00000593330 LEFTY1O75610 366 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 ZP2Q05996 745 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 DTHD1Q6ZMT9 781 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 SIAH1Q8IUQ4 282 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 TOP6BLQ8N6T0 577 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 KCNB2Q92953 911 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 LMCD1Q9NZU5 365 aa9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 GPN3Q9UHW5 284 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-219ENST00000593330 GNAT3A8MTJ3 354 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 H3BRB1 525 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 CD96P40200 585 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 CLCN7P51798 805 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 MLANAQ16655 118 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 CCDC120Q96HB5 630 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 FAM129BQ96TA1 746 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 TUT1Q9H6E5 874 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 PLAGL2Q9UPG8 496 aa9.11□□□□□ -0.95
SOX2-OT-219ENST00000593330 LCE4AQ5TA78 99 aa9.1□□□□□ -0.95
SOX2-OT-219ENST00000593330 PHLDB3Q6NSJ2 640 aa9.1□□□□□ -0.95
SOX2-OT-219ENST00000593330 ISL2Q96A47 359 aa9.1□□□□□ -0.95
SOX2-OT-219ENST00000593330 EIF1AYO14602 144 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-219ENST00000593330 ORC1Q13415 861 aa9.09□□□□□ -0.95
SOX2-OT-219ENST00000593330 ZC3H12AQ5D1E8 599 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-219ENST00000593330 TMC1Q8TDI8 760 aa9.09□□□□□ -0.95
SOX2-OT-219ENST00000593330 KRTAP4-2Q9BYR5 136 aa9.09□□□□□ -0.95
SOX2-OT-219ENST00000593330 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
SOX2-OT-219ENST00000593330 ZNF157P51786 506 aaPredicted RBP9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 MPZL3Q6UWV2 235 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 KCT2Q8NC54 265 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 DMRTB1Q96MA1 342 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 PRDM10Q9NQV6 1147 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 CTNND2Q9UQB3 1225 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 SAMM50Q9Y512 469 aa9.08□□□□□ -0.96
SOX2-OT-219ENST00000593330 GLI1P08151 1106 aa9.07□□□□□ -0.96
SOX2-OT-219ENST00000593330 GRM2Q14416 872 aa9.07□□□□□ -0.96
SOX2-OT-219ENST00000593330 SULF2Q8IWU5 870 aa9.07□□□□□ -0.96
SOX2-OT-219ENST00000593330 ACSBG1Q96GR2 724 aa9.07□□□□□ -0.96
SOX2-OT-219ENST00000593330 PICK1Q9NRD5 415 aa9.07□□□□□ -0.96
SOX2-OT-219ENST00000593330 ZNF503-AS2A6NEH8 195 aa9.06□□□□□ -0.96
SOX2-OT-219ENST00000593330 NEFMP07197 916 aa9.06□□□□□ -0.96
SOX2-OT-219ENST00000593330 ARNTP27540 789 aa9.06□□□□□ -0.96
SOX2-OT-219ENST00000593330 TMEM67Q5HYA8 995 aa9.06□□□□□ -0.96
SOX2-OT-219ENST00000593330 PDZD3Q86UT5 571 aa9.06□□□□□ -0.96
SOX2-OT-219ENST00000593330 USTQ9Y2C2 406 aa9.06□□□□□ -0.96
SOX2-OT-219ENST00000593330 NFIBO00712 420 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 NME2P22392 152 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 CDC37L1Q7L3B6 337 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 CYFIP1Q7L576 1253 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 SPACA3Q8IXA5 215 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 LRRC56Q8IYG6 542 aaPredicted RBP9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 KIRREL1Q96J84 757 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 FOXQ1Q9C009 403 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 RAPGEFL1Q9UHV5 662 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 U3KQE9 123 aa9.05□□□□□ -0.96
SOX2-OT-219ENST00000593330 HEXIM2Q96MH2 286 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-219ENST00000593330 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-219ENST00000593330 MAPK8IP1Q9UQF2 711 aa9.04□□□□□ -0.96
SOX2-OT-219ENST00000593330 FANCGO15287 622 aa9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 FCGRTP55899 365 aa9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 ARHGAP4P98171 946 aa9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 MAP1SQ66K74 1059 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 SCARA3Q6AZY7 606 aa9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 SYDE1Q6ZW31 735 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 CSRNP1Q96S65 589 aa9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 PITPNM2Q9BZ72 1349 aa9.03□□□□□ -0.96
SOX2-OT-219ENST00000593330 CFPP27918 469 aa9.02□□□□□ -0.97
SOX2-OT-219ENST00000593330 LILRA6Q6PI73 481 aa9.02□□□□□ -0.97
SOX2-OT-219ENST00000593330 FBXO15Q8NCQ5 510 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-219ENST00000593330 LIN37Q96GY3 246 aaPredicted RBP9.02□□□□□ -0.97
SOX2-OT-219ENST00000593330 NIF3L1Q9GZT8 377 aa9.02□□□□□ -0.97
SOX2-OT-219ENST00000593330 PRDM7Q9NQW5 492 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms