RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
NPC1-214ENST00000593280 RAB11FIP4Q86YS3 637 aa13.99□□□□□ -0.17
NPC1-214ENST00000593280 MTA3Q9BTC8 594 aa13.99□□□□□ -0.17
NPC1-214ENST00000593280 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
NPC1-214ENST00000593280 ATP8A2Q9NTI2 1148 aa13.99□□□□□ -0.17
NPC1-214ENST00000593280 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
NPC1-214ENST00000593280 DLEC1Q9Y238 1755 aa13.99□□□□□ -0.17
NPC1-214ENST00000593280 KRT85P78386 507 aa13.98□□□□□ -0.17
NPC1-214ENST00000593280 SLC15A2Q16348 729 aa13.98□□□□□ -0.17
NPC1-214ENST00000593280 STK11IPQ8N1F8 1099 aa13.98□□□□□ -0.17
NPC1-214ENST00000593280 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
NPC1-214ENST00000593280 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
NPC1-214ENST00000593280 NOL10Q9BSC4 688 aaKnown RBP13.98□□□□□ -0.17
NPC1-214ENST00000593280 ZSCAN16Q9H4T2 348 aaPredicted RBP13.98□□□□□ -0.17
NPC1-214ENST00000593280 ERICH2A1L162 156 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 CCDC69A6NI79 296 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 ZBTB43O43298 467 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 GADD45BO75293 160 aaPredicted RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 CDKL5O76039 1030 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 LDHCP07864 332 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 PCP11498 1178 aaKnown RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 FOSBP53539 338 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 EN1Q05925 392 aaPredicted RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 RESTQ13127 1097 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 ZSCAN23Q3MJ62 389 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 CCDC125Q86Z20 511 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 ESR2Q92731 530 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 TMX4Q9H1E5 349 aaPredicted RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 MROH7-TTC4A0A0A0MT08 1334 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 CYP2D7A0A087X1C5 515 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 GOLGA8AA7E2F4 631 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 BAG3O95817 575 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 UBE2HP62256 183 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 WTAPQ15007 396 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 MICU3Q86XE3 530 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 TBC1D22AQ8WUA7 517 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 SENP2Q9HC62 589 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 DCP1AQ9NPI6 582 aaPredicted RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
NPC1-214ENST00000593280 SLC12A7Q9Y666 1083 aa13.97□□□□□ -0.17
NPC1-214ENST00000593280 NID2Q14112 1375 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 USP17L12C9JPN9 530 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 USP17L21D6R901 530 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 PPFIA3O75145 1194 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 SLC3A2P08195 630 aaKnown RBP13.96□□□□□ -0.17
NPC1-214ENST00000593280 FDPSP14324 419 aaKnown RBP13.96□□□□□ -0.17
NPC1-214ENST00000593280 ZNF445P59923 1031 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 DPP8Q6V1X1 898 aaPredicted RBP13.96□□□□□ -0.17
NPC1-214ENST00000593280 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 MPNDQ8N594 471 aa13.96□□□□□ -0.17
NPC1-214ENST00000593280 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
NPC1-214ENST00000593280 DIXDC1Q155Q3 683 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 GRIK5Q16478 980 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 SBK1Q52WX2 424 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 MFSD14BQ5SR56 506 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 TMTC2Q8N394 836 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 ZNF622Q969S3 477 aaKnown RBP eCLIP13.95□□□□□ -0.18
NPC1-214ENST00000593280 ZKSCAN3Q9BRR0 538 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
NPC1-214ENST00000593280 COA1Q9GZY4 146 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 ELP1O95163 1332 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 FAM205AQ6ZU69 1335 aa13.95□□□□□ -0.18
NPC1-214ENST00000593280 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 FGRP09769 529 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 RXRAP19793 462 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 USP5P45974 858 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 PPP4CP60510 307 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 SLF2Q8IX21 1173 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 SH3RF3Q8TEJ3 882 aaPredicted RBP13.94□□□□□ -0.18
NPC1-214ENST00000593280 C8orf76Q96K31 380 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 DDX60LQ5H9U9 1706 aaKnown RBP13.94□□□□□ -0.18
NPC1-214ENST00000593280 TNKSO95271 1327 aa13.94□□□□□ -0.18
NPC1-214ENST00000593280 H0YIN7 160 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 ORC4O43929 436 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 RANBP6O60518 1105 aaKnown RBP13.93□□□□□ -0.18
NPC1-214ENST00000593280 CDC27P30260 824 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 ADD1P35611 737 aaKnown RBP13.93□□□□□ -0.18
NPC1-214ENST00000593280 MRE11P49959 708 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 RCAN1P53805 252 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 SF3B2Q13435 895 aaKnown RBP13.93□□□□□ -0.18
NPC1-214ENST00000593280 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 SPATA32Q96LK8 384 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 RTFDC1Q9BY42 306 aaPredicted RBP13.93□□□□□ -0.18
NPC1-214ENST00000593280 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
NPC1-214ENST00000593280 MCM9Q9NXL9 1143 aa13.93□□□□□ -0.18
NPC1-214ENST00000593280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPC1-214ENST00000593280 FOCADQ5VW36 1801 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms