RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 NEK1Q96PY6 1258 aa13.7□□□□□ -0.22
CACNA1A-213ENST00000593267 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
CACNA1A-213ENST00000593267 CYP46A1Q9Y6A2 500 aa13.7□□□□□ -0.22
CACNA1A-213ENST00000593267 ZC3H4Q9UPT8 1303 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 LMNB1P20700 586 aa13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 SBK1Q52WX2 424 aa13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 HSCBQ8IWL3 235 aa13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-213ENST00000593267 RPS6KB1P23443 525 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 USP5P45974 858 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 MCM2P49736 904 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 PPARAQ07869 468 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 COL9A3Q14050 684 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 TNIP1Q15025 636 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 CTR9Q6PD62 1173 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 ROBO3Q96MS0 1386 aa13.68□□□□□ -0.22
CACNA1A-213ENST00000593267 FLT1P17948 1338 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 K7ELQ4 463 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 CPA1P15085 419 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 MMP14P50281 582 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 CTDSPL2Q05D32 466 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 CDC42EP5Q6NZY7 148 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 MB21D2Q8IYB1 491 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 JMYQ8N9B5 988 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 STAG1Q8WVM7 1258 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 PDRG1Q9NUG6 133 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 HDAC9Q9UKV0 1011 aa13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-213ENST00000593267 NEDD4P46934 1319 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 WDR19Q8NEZ3 1342 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 USP17L21D6R901 530 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 AK2P54819 239 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 CFAP100Q494V2 611 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 MTMR14Q8NCE2 650 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 USP40Q9NVE5 1235 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 PCDHAC2Q9Y5I4 1007 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 SIPA1L1O43166 1804 aa13.66□□□□□ -0.22
CACNA1A-213ENST00000593267 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 CYP2D7A0A087X1C5 515 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 MINDY4BA8MYZ0 360 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 FGRP09769 529 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 C12orf60Q5U649 245 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 IDI2Q9BXS1 227 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 RNF41Q9H4P4 317 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 CNNM2Q9H8M5 875 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 MCM9Q9NXL9 1143 aa13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-213ENST00000593267 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 ZNF280AP59817 542 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 TRDNQ13061 729 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 TOB2Q14106 344 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 COL13A1Q5TAT6 717 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 MFSD6Q6ZSS7 791 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 DPF2Q92785 391 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 ZBED3Q96IU2 234 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 AGXT2Q9BYV1 514 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 KRT23Q9C075 422 aa13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNA1A-213ENST00000593267 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 CYP2D6P10635 497 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 MCM5P33992 734 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 ANTXR2P58335 489 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 EVX2Q03828 476 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 ANKRD1Q15327 319 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 TCEANC2Q96MN5 208 aa13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 OSBPL5Q9H0X9 879 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-213ENST00000593267 MYH8P13535 1937 aa13.62□□□□□ -0.23
CACNA1A-213ENST00000593267 B4E1Z4 1266 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms