RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ZGPATQ8N5A5 531 aaKnown RBP21.69■■□□□ 1.06
RETREG3-212ENST00000593251 SHISA4Q96DD7 197 aa21.69■■□□□ 1.06
RETREG3-212ENST00000593251 PARK7Q99497 189 aaKnown RBP21.69■■□□□ 1.06
RETREG3-212ENST00000593251 DDX4Q9NQI0 724 aaKnown RBP21.69■■□□□ 1.06
RETREG3-212ENST00000593251 COLQQ9Y215 455 aaPredicted RBP21.69■■□□□ 1.06
RETREG3-212ENST00000593251 ZHX2Q9Y6X8 837 aa21.69■■□□□ 1.06
RETREG3-212ENST00000593251 ATAD5Q96QE3 1844 aa21.69■■□□□ 1.06
RETREG3-212ENST00000593251 DDTLA6NHG4 134 aaPredicted RBP21.68■■□□□ 1.06
RETREG3-212ENST00000593251 CXCL11O14625 94 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 BCRP11274 1271 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 PTPRAP18433 802 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 HOXD10P28358 340 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 GRK4P32298 578 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 PICALMQ13492 652 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 GADL1Q6ZQY3 521 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 PICK1Q9NRD5 415 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.68■■□□□ 1.06
RETREG3-212ENST00000593251 HDAC5Q9UQL6 1122 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 CEP290O15078 2479 aa21.68■■□□□ 1.06
RETREG3-212ENST00000593251 A0A1B0GUL7 405 aa21.67■■□□□ 1.06
RETREG3-212ENST00000593251 H0YGN5 161 aa21.67■■□□□ 1.06
RETREG3-212ENST00000593251 BTDP43251 543 aa21.67■■□□□ 1.06
RETREG3-212ENST00000593251 PRKCZQ05513 592 aa21.67■■□□□ 1.06
RETREG3-212ENST00000593251 TFCP2Q12800 502 aa21.67■■□□□ 1.06
RETREG3-212ENST00000593251 XAGE2Q96GT9 111 aa21.67■■□□□ 1.06
RETREG3-212ENST00000593251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.67■■□□□ 1.06
RETREG3-212ENST00000593251 A0A0G2JLL6 359 aaPredicted RBP21.66■■□□□ 1.06
RETREG3-212ENST00000593251 CT47B1P0C2W7 299 aaPredicted RBP21.66■■□□□ 1.06
RETREG3-212ENST00000593251 FXR1P51114 621 aaKnown RBP eCLIP21.66■■□□□ 1.06
RETREG3-212ENST00000593251 PRRT2Q7Z6L0 340 aaPredicted RBP21.66■■□□□ 1.06
RETREG3-212ENST00000593251 CCDC84Q86UT8 332 aaPredicted RBP21.66■■□□□ 1.06
RETREG3-212ENST00000593251 BIN2Q9UBW5 565 aaPredicted RBP21.66■■□□□ 1.06
RETREG3-212ENST00000593251 GABRQQ9UN88 632 aa21.66■■□□□ 1.06
RETREG3-212ENST00000593251 AFG3L2Q9Y4W6 797 aa21.66■■□□□ 1.06
RETREG3-212ENST00000593251 DOCK3Q8IZD9 2030 aa21.66■■□□□ 1.06
RETREG3-212ENST00000593251 MROH7-TTC4A0A0A0MT08 1334 aa21.65■■□□□ 1.06
RETREG3-212ENST00000593251 SRGAP3O43295 1099 aa21.65■■□□□ 1.06
RETREG3-212ENST00000593251 CCL5P13501 91 aa21.65■■□□□ 1.06
RETREG3-212ENST00000593251 FCGRTP55899 365 aa21.65■■□□□ 1.06
RETREG3-212ENST00000593251 PDS5AQ29RF7 1337 aaKnown RBP21.64■■□□□ 1.05
RETREG3-212ENST00000593251 ZBTB22O15209 634 aa21.64■■□□□ 1.05
RETREG3-212ENST00000593251 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.05
RETREG3-212ENST00000593251 MAP3K10Q02779 954 aa21.64■■□□□ 1.05
RETREG3-212ENST00000593251 MECOMQ03112 1051 aa21.64■■□□□ 1.05
RETREG3-212ENST00000593251 SPTY2D1Q68D10 685 aaPredicted RBP21.64■■□□□ 1.05
RETREG3-212ENST00000593251 FASTKD5Q7L8L6 764 aaKnown RBP21.64■■□□□ 1.05
RETREG3-212ENST00000593251 SLF2Q8IX21 1173 aa21.64■■□□□ 1.05
RETREG3-212ENST00000593251 ZNF384Q8TF68 577 aa21.64■■□□□ 1.05
RETREG3-212ENST00000593251 FAM163AQ96GL9 167 aaPredicted RBP21.64■■□□□ 1.05
RETREG3-212ENST00000593251 NEUROD6Q96NK8 337 aa21.64■■□□□ 1.05
RETREG3-212ENST00000593251 TRIM75PA6NK02 468 aa21.63■■□□□ 1.05
RETREG3-212ENST00000593251 FAM196BA6NMK8 535 aa21.63■■□□□ 1.05
RETREG3-212ENST00000593251 PI16Q6UXB8 463 aa21.63■■□□□ 1.05
RETREG3-212ENST00000593251 ERICH6Q7L0X2 663 aa21.63■■□□□ 1.05
RETREG3-212ENST00000593251 RNF208Q9H0X6 261 aa21.63■■□□□ 1.05
RETREG3-212ENST00000593251 AKAP2Q9Y2D5 859 aa21.63■■□□□ 1.05
RETREG3-212ENST00000593251 CTNND1O60716 968 aaKnown RBP21.62■■□□□ 1.05
RETREG3-212ENST00000593251 GNAI3P08754 354 aa21.62■■□□□ 1.05
RETREG3-212ENST00000593251 RHBDL3P58872 404 aa21.62■■□□□ 1.05
RETREG3-212ENST00000593251 MVPQ14764 893 aaKnown RBP21.62■■□□□ 1.05
RETREG3-212ENST00000593251 DPF3Q92784 378 aa21.62■■□□□ 1.05
RETREG3-212ENST00000593251 TNNQ9UQP3 1299 aa21.62■■□□□ 1.05
RETREG3-212ENST00000593251 MYO5AQ9Y4I1 1855 aaKnown RBP21.61■■□□□ 1.05
RETREG3-212ENST00000593251 GPR75-ASB3A0A0A6YYF3 556 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 GJB1P08034 283 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 GJA8P48165 433 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 UBXN2AP68543 259 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 TBC1D9Q6ZT07 1266 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 HMG20BQ9P0W2 317 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 LOC285556D6RIA3 1793 aa21.61■■□□□ 1.05
RETREG3-212ENST00000593251 CDK5RAP2Q96SN8 1893 aa21.6■■□□□ 1.05
RETREG3-212ENST00000593251 MTX1Q13505 466 aa21.6■■□□□ 1.05
RETREG3-212ENST00000593251 NKX2-3Q8TAU0 364 aa21.6■■□□□ 1.05
RETREG3-212ENST00000593251 SMCR8Q8TEV9 937 aaPredicted RBP21.6■■□□□ 1.05
RETREG3-212ENST00000593251 UNC93B1Q9H1C4 597 aa21.6■■□□□ 1.05
RETREG3-212ENST00000593251 TRIOBPQ9H2D6 2365 aa21.6■■□□□ 1.05
RETREG3-212ENST00000593251 ADCY3O60266 1144 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 ELNP15502 786 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 TREML2Q5T2D2 321 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 GORABQ5T7V8 394 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 CHRDL2Q6WN34 429 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 SLAIN1Q8ND83 568 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 ARHGAP45Q92619 1136 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 SLC45A1Q9Y2W3 748 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 SIPA1L1O43166 1804 aa21.59■■□□□ 1.05
RETREG3-212ENST00000593251 FLT3LGP49771 235 aa21.58■■□□□ 1.05
RETREG3-212ENST00000593251 SPATA5Q8NB90 893 aa21.58■■□□□ 1.05
RETREG3-212ENST00000593251 NSUN4Q96CB9 384 aaKnown RBP21.58■■□□□ 1.05
RETREG3-212ENST00000593251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.58■■□□□ 1.05
RETREG3-212ENST00000593251 RAI14Q9P0K7 980 aa21.58■■□□□ 1.05
RETREG3-212ENST00000593251 TNPO2O14787 897 aaKnown RBP21.57■■□□□ 1.04
RETREG3-212ENST00000593251 UBE2Q1Q7Z7E8 422 aa21.57■■□□□ 1.04
RETREG3-212ENST00000593251 ANKRD13CQ8N6S4 541 aa21.57■■□□□ 1.04
RETREG3-212ENST00000593251 U2AF1L4Q8WU68 220 aaKnown RBP21.57■■□□□ 1.04
RETREG3-212ENST00000593251 TAOK2Q9UL54 1235 aa21.57■■□□□ 1.04
RETREG3-212ENST00000593251 AGTPBP1Q9UPW5 1226 aa21.57■■□□□ 1.04
RETREG3-212ENST00000593251 MAST2Q6P0Q8 1798 aa21.56■■□□□ 1.04
RETREG3-212ENST00000593251 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
RETREG3-212ENST00000593251 TBC1D12O60347 775 aa21.56■■□□□ 1.04
RETREG3-212ENST00000593251 LDHCP07864 332 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms