RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MBD4O95243 580 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 USP5P45974 858 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 FKBP1BP68106 108 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 TTLL12Q14166 644 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-221ENST00000593026 MAPKAPK5Q8IW41 473 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 ZFPM1Q8IX07 1006 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 LCORLQ8N3X6 602 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 KLRG1Q96E93 195 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 HOOK2Q96ED9 719 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 CRNKL1Q9BZJ0 848 aaKnown RBP17.99■□□□□ 0.47
DDX39A-221ENST00000593026 PUS7LQ9H0K6 701 aaKnown RBP17.99■□□□□ 0.47
DDX39A-221ENST00000593026 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
DDX39A-221ENST00000593026 ARMT1Q9H993 441 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 AK9Q5TCS8 1911 aa17.99■□□□□ 0.47
DDX39A-221ENST00000593026 FLT1P17948 1338 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 GSPT1P15170 499 aaKnown RBP17.98■□□□□ 0.47
DDX39A-221ENST00000593026 HTRA3P83110 453 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 PRKG1Q13976 671 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 TICAM2Q86XR7 235 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 OSBP2Q969R2 916 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 TLL2Q9Y6L7 1015 aa17.98■□□□□ 0.47
DDX39A-221ENST00000593026 COL2A1P02458 1487 aaPredicted RBP17.98■□□□□ 0.47
DDX39A-221ENST00000593026 ATRNL1Q5VV63 1379 aa17.97■□□□□ 0.47
DDX39A-221ENST00000593026 PPP1R12BO60237 982 aaPredicted RBP17.97■□□□□ 0.47
DDX39A-221ENST00000593026 ZMYM1Q5SVZ6 1142 aa17.97■□□□□ 0.47
DDX39A-221ENST00000593026 SH3BP5LQ7L8J4 393 aa17.97■□□□□ 0.47
DDX39A-221ENST00000593026 ARMC9Q7Z3E5 817 aa17.97■□□□□ 0.47
DDX39A-221ENST00000593026 SAPCD2Q86UD0 394 aa17.97■□□□□ 0.47
DDX39A-221ENST00000593026 CSRNP1Q96S65 589 aa17.97■□□□□ 0.47
DDX39A-221ENST00000593026 DDTLA6NHG4 134 aaPredicted RBP17.96■□□□□ 0.47
DDX39A-221ENST00000593026 SDSP20132 328 aa17.96■□□□□ 0.47
DDX39A-221ENST00000593026 HUNKP57058 714 aa17.96■□□□□ 0.47
DDX39A-221ENST00000593026 DCAF15Q66K64 600 aa17.96■□□□□ 0.47
DDX39A-221ENST00000593026 MOB2Q70IA6 237 aa17.96■□□□□ 0.47
DDX39A-221ENST00000593026 ANGEL1Q9UNK9 670 aaKnown RBP17.96■□□□□ 0.47
DDX39A-221ENST00000593026 M0R2C6 588 aa17.95■□□□□ 0.46
DDX39A-221ENST00000593026 STRBPQ96SI9 672 aaKnown RBP17.95■□□□□ 0.46
DDX39A-221ENST00000593026 DHX36Q9H2U1 1008 aaKnown RBP17.95■□□□□ 0.46
DDX39A-221ENST00000593026 SAP30BPQ9UHR5 308 aaKnown RBP17.95■□□□□ 0.46
DDX39A-221ENST00000593026 FZD1Q9UP38 647 aa17.95■□□□□ 0.46
DDX39A-221ENST00000593026 UBE2Q2LH0YL09 131 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 GPAA1O43292 621 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 PRKAB2O43741 272 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 IREB2P48200 963 aaKnown RBP17.94■□□□□ 0.46
DDX39A-221ENST00000593026 JMYQ8N9B5 988 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 SDR42E1Q8WUS8 393 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 SEC62Q99442 399 aaKnown RBP17.94■□□□□ 0.46
DDX39A-221ENST00000593026 DIAPH3Q9NSV4 1193 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 PALD1Q9ULE6 856 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 SLC4A4Q9Y6R1 1079 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 NAV1Q8NEY1 1877 aa17.94■□□□□ 0.46
DDX39A-221ENST00000593026 DDX60LQ5H9U9 1706 aaKnown RBP17.93■□□□□ 0.46
DDX39A-221ENST00000593026 RASSF10A6NK89 507 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 HIP1O00291 1037 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
DDX39A-221ENST00000593026 GNAT2P19087 354 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
DDX39A-221ENST00000593026 MAP3K11Q16584 847 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 DEFB115Q30KQ5 88 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 MIGA2Q7L4E1 593 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 DDRGK1Q96HY6 314 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 HHIPL1Q96JK4 782 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 ZNF341Q9BYN7 854 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 HELLSQ9NRZ9 838 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 ATP8A2Q9NTI2 1148 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 MYH1P12882 1939 aa17.93■□□□□ 0.46
DDX39A-221ENST00000593026 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
DDX39A-221ENST00000593026 HLA-DOAP06340 250 aa17.92■□□□□ 0.46
DDX39A-221ENST00000593026 PAXIP1Q6ZW49 1069 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-221ENST00000593026 DCP1AQ9NPI6 582 aaPredicted RBP17.92■□□□□ 0.46
DDX39A-221ENST00000593026 MCM9Q9NXL9 1143 aa17.92■□□□□ 0.46
DDX39A-221ENST00000593026 PI4KBQ9UBF8 816 aa17.92■□□□□ 0.46
DDX39A-221ENST00000593026 MKRN1Q9UHC7 482 aaKnown RBP17.92■□□□□ 0.46
DDX39A-221ENST00000593026 SLC4A8Q2Y0W8 1093 aa17.91■□□□□ 0.46
DDX39A-221ENST00000593026 MCMDC2Q4G0Z9 681 aa17.91■□□□□ 0.46
DDX39A-221ENST00000593026 LDLRAD1Q5T700 205 aa17.91■□□□□ 0.46
DDX39A-221ENST00000593026 TTC6Q86TZ1 520 aa17.91■□□□□ 0.46
DDX39A-221ENST00000593026 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 UNCXA6NJT0 531 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 POLR3DP05423 398 aaPredicted RBP17.9■□□□□ 0.46
DDX39A-221ENST00000593026 BMP2KLQ5H9B9 411 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 RGMBQ6NW40 437 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 CCDC129Q6ZRS4 1044 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 ANKRD13AQ8IZ07 590 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
DDX39A-221ENST00000593026 WRNIP1Q96S55 665 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
DDX39A-221ENST00000593026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.9■□□□□ 0.46
DDX39A-221ENST00000593026 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 TBC1D12O60347 775 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 APPP05067 770 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 ZNF157P51786 506 aaPredicted RBP17.89■□□□□ 0.45
DDX39A-221ENST00000593026 MAP3K9P80192 1104 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 MAP3K10Q02779 954 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 GRM1Q13255 1194 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 GIMAP6Q6P9H5 292 aa17.89■□□□□ 0.45
DDX39A-221ENST00000593026 CWC27Q6UX04 472 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms