RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 BRI3BPQ8WY22 251 aa11.9□□□□□ -0.5
PRKCSH-215ENST00000592435 EAF2Q96CJ1 260 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-215ENST00000592435 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-215ENST00000592435 ZBTB40Q9NUA8 1239 aa11.9□□□□□ -0.5
PRKCSH-215ENST00000592435 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
PRKCSH-215ENST00000592435 PHF20L1A8MW92 1017 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 NOL9Q5SY16 702 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 SH3BP5LQ7L8J4 393 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 DDX4Q9NQI0 724 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 SNRKQ9NRH2 765 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 LAMB1P07942 1786 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 RFX7Q2KHR2 1363 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 ATRNL1Q5VV63 1379 aa11.89□□□□□ -0.51
PRKCSH-215ENST00000592435 DDTLA6NHG4 134 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 SP3Q02447 781 aa11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 PDE3AQ14432 1141 aa11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 FBXO46Q6PJ61 603 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 CCDC8Q9H0W5 538 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
PRKCSH-215ENST00000592435 BTBD19C9JJ37 291 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 CXCL11O14625 94 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 TBC1D12O60347 775 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 HMMRO75330 724 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 BAG3O95817 575 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 ZAP70P43403 619 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 PPP4CP60510 307 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 PICALMQ13492 652 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 TAF1CQ15572 869 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 EXOC6BQ9Y2D4 811 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 OTOFQ9HC10 1997 aa11.87□□□□□ -0.51
PRKCSH-215ENST00000592435 MYH2Q9UKX2 1941 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 TLR2O60603 784 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 PLCG2P16885 1265 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 OTOP1Q7RTM1 612 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 SCYL3Q8IZE3 742 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 RHPN1Q8TCX5 695 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 TLR7Q9NYK1 1049 aaKnown RBP11.86□□□□□ -0.51
PRKCSH-215ENST00000592435 COL2A1P02458 1487 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 PTPRAP18433 802 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 ARHGEF6Q15052 776 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 ANKRD23Q86SG2 305 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 AACSQ86V21 672 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 TEX11Q8IYF3 940 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
PRKCSH-215ENST00000592435 MOGSQ13724 837 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 CD99L2Q8TCZ2 262 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 DHX36Q9H2U1 1008 aaKnown RBP11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 EFCC1Q9HA90 598 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 IL1RAPL2Q9NP60 686 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 AATFQ9NY61 560 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 PI4KBQ9UBF8 816 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 ZHX2Q9Y6X8 837 aa11.84□□□□□ -0.51
PRKCSH-215ENST00000592435 PDHXO00330 501 aa11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 C17orf99Q6UX52 265 aa11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 FASTKD5Q7L8L6 764 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 FOXP4Q8IVH2 680 aaPredicted RBP11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 PTPN22Q9Y2R2 807 aa11.83□□□□□ -0.52
PRKCSH-215ENST00000592435 A0A0G2JLL6 359 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 IFIT2P09913 472 aaKnown RBP11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 SLURP2P0DP57 97 aa11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 CYP7A1P22680 504 aa11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 MAP3K12Q12852 859 aa11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 TTF1Q15361 905 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 PRRT2Q7Z6L0 340 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 METTL16Q86W50 562 aaKnown RBP11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 ANTXR1Q9H6X2 564 aa11.82□□□□□ -0.52
PRKCSH-215ENST00000592435 APBB1O00213 710 aa11.81□□□□□ -0.52
PRKCSH-215ENST00000592435 GNRH1P01148 92 aa11.81□□□□□ -0.52
PRKCSH-215ENST00000592435 CAP2P40123 477 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms