RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
TPM4-215ENST00000592138 C2orf69Q8N8R5 385 aa11.73□□□□□ -0.53
TPM4-215ENST00000592138 SH3RF3Q8TEJ3 882 aaPredicted RBP11.73□□□□□ -0.53
TPM4-215ENST00000592138 APPBP2Q92624 585 aa11.73□□□□□ -0.53
TPM4-215ENST00000592138 FSD1Q9BTV5 496 aa11.73□□□□□ -0.53
TPM4-215ENST00000592138 PAPPA2Q9BXP8 1791 aa11.73□□□□□ -0.53
TPM4-215ENST00000592138 OSBPL5Q9H0X9 879 aaPredicted RBP11.73□□□□□ -0.53
TPM4-215ENST00000592138 DHX36Q9H2U1 1008 aaKnown RBP11.73□□□□□ -0.53
TPM4-215ENST00000592138 GBA2Q9HCG7 927 aaPredicted RBP11.73□□□□□ -0.53
TPM4-215ENST00000592138 DDX4Q9NQI0 724 aaKnown RBP11.73□□□□□ -0.53
TPM4-215ENST00000592138 SCAF8Q9UPN6 1271 aaKnown RBP11.73□□□□□ -0.53
TPM4-215ENST00000592138 PDE4DIPQ5VU43 2346 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 FLT1P17948 1338 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 RASSF10A6NK89 507 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 PPP1R12BO60237 982 aaPredicted RBP11.72□□□□□ -0.53
TPM4-215ENST00000592138 DYNLL1P63167 89 aaKnown RBP11.72□□□□□ -0.53
TPM4-215ENST00000592138 TTC22Q5TAA0 569 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
TPM4-215ENST00000592138 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 MIGA1Q8NAN2 632 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
TPM4-215ENST00000592138 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
TPM4-215ENST00000592138 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 HIP1O00291 1037 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 MAP3K10Q02779 954 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 TCP10Q12799 353 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 PICALMQ13492 652 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 DCAF15Q66K64 600 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 TGFBRAP1Q8WUH2 860 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 AIDAQ96BJ3 306 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 PUS7LQ9H0K6 701 aaKnown RBP11.71□□□□□ -0.53
TPM4-215ENST00000592138 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
TPM4-215ENST00000592138 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 TRPM7Q96QT4 1865 aa11.71□□□□□ -0.53
TPM4-215ENST00000592138 MYO5AQ9Y4I1 1855 aaKnown RBP11.7□□□□□ -0.54
TPM4-215ENST00000592138 FOXN1O15353 648 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 TBC1D12O60347 775 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 MBD4O95243 580 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
TPM4-215ENST00000592138 GNAT2P19087 354 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 USP5P45974 858 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 ZMYM1Q5SVZ6 1142 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 LDLRAD1Q5T700 205 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 METTL16Q86W50 562 aaKnown RBP11.7□□□□□ -0.54
TPM4-215ENST00000592138 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 OSBP2Q969R2 916 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
TPM4-215ENST00000592138 DDTLA6NHG4 134 aaPredicted RBP11.69□□□□□ -0.54
TPM4-215ENST00000592138 CHGBP05060 677 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
TPM4-215ENST00000592138 HUNKP57058 714 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 SLFNL1Q499Z3 407 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 MAPKAPK5Q8IW41 473 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 ZFPM1Q8IX07 1006 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.69□□□□□ -0.54
TPM4-215ENST00000592138 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
TPM4-215ENST00000592138 EHD4Q9H223 541 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 PI4KBQ9UBF8 816 aa11.69□□□□□ -0.54
TPM4-215ENST00000592138 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
TPM4-215ENST00000592138 ABT1Q9ULW3 272 aaKnown RBP11.69□□□□□ -0.54
TPM4-215ENST00000592138 THSD7BQ9C0I4 1608 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 FOCADQ5VW36 1801 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 GPAA1O43292 621 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 USP2O75604 605 aaPredicted RBP11.68□□□□□ -0.54
TPM4-215ENST00000592138 HLA-DOAP06340 250 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 SDSP20132 328 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 DEFB115Q30KQ5 88 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
TPM4-215ENST00000592138 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 ZNF341Q9BYN7 854 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 DCP1AQ9NPI6 582 aaPredicted RBP11.68□□□□□ -0.54
TPM4-215ENST00000592138 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
TPM4-215ENST00000592138 POLR2AP24928 1970 aaKnown RBP11.68□□□□□ -0.54
TPM4-215ENST00000592138 DDX60LQ5H9U9 1706 aaKnown RBP11.68□□□□□ -0.54
TPM4-215ENST00000592138 MYH7P12883 1935 aa11.68□□□□□ -0.54
TPM4-215ENST00000592138 M0R2C6 588 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 ECE1P42892 770 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
TPM4-215ENST00000592138 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
TPM4-215ENST00000592138 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 BMP2KLQ5H9B9 411 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 RGMBQ6NW40 437 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 TTC6Q86TZ1 520 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 FOXP4Q8IVH2 680 aaPredicted RBP11.67□□□□□ -0.54
TPM4-215ENST00000592138 SDR42E1Q8WUS8 393 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 CCDC102AQ96A19 550 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
TPM4-215ENST00000592138 SLC4A4Q9Y6R1 1079 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms