RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ZKSCAN3Q9BRR0 538 aa22.94■■□□□ 1.26
MBD3-209ENST00000592012 HIBADHP31937 336 aaKnown RBP22.93■■□□□ 1.26
MBD3-209ENST00000592012 SART3Q15020 963 aaKnown RBP22.93■■□□□ 1.26
MBD3-209ENST00000592012 ANO6Q4KMQ2 910 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 CCDC73Q6ZRK6 1079 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 NID2Q14112 1375 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 MINDY4BA8MYZ0 360 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 YEATS4O95619 227 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 PTMAP06454 111 aaKnown RBP22.93■■□□□ 1.26
MBD3-209ENST00000592012 DYNLL1P63167 89 aaKnown RBP22.93■■□□□ 1.26
MBD3-209ENST00000592012 FAM160A1Q05DH4 1040 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 SASS6Q6UVJ0 657 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
MBD3-209ENST00000592012 PDS5AQ29RF7 1337 aaKnown RBP22.93■■□□□ 1.26
MBD3-209ENST00000592012 WTAPQ15007 396 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 KRT40Q6A162 431 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 SYNE3Q6ZMZ3 975 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 KCNG4Q8TDN1 519 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 NSUN4Q96CB9 384 aaKnown RBP22.92■■□□□ 1.26
MBD3-209ENST00000592012 CTAGE5O15320 804 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 ZNF500O60304 480 aaPredicted RBP22.92■■□□□ 1.26
MBD3-209ENST00000592012 STK38Q15208 465 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 FAM196AQ6ZSG2 479 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 TMTC2Q8N394 836 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 FSIP1Q8NA03 581 aa22.92■■□□□ 1.26
MBD3-209ENST00000592012 A0A1W2PQ27 194 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 A0A1W2PQ64 194 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 A0A1W2PQD8 194 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 SMIM22K7EJ46 135 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 MEX3CQ5U5Q3 659 aaKnown RBP22.91■■□□□ 1.26
MBD3-209ENST00000592012 CBX8Q9HC52 389 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 EP400Q96L91 3159 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 IFNAR1P17181 557 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 LUZP1Q86V48 1076 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 BRIP1Q9BX63 1249 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 STK36Q9NRP7 1315 aa22.91■■□□□ 1.26
MBD3-209ENST00000592012 ERICH2A1L162 156 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 SPTLC2O15270 562 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 PLCB2Q00722 1185 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 TXNRD3Q86VQ6 643 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 MRPS27Q92552 414 aaKnown RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 LRRC4BQ9NT99 713 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 UBE2Q2LH0YL09 131 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 KINO60870 393 aaKnown RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 FMNL1O95466 1100 aaPredicted RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 MECOMQ03112 1051 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 SSRP1Q08945 709 aaKnown RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 NFIXQ14938 502 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 SF3A1Q15459 793 aaKnown RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 ANO1Q5XXA6 986 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 FMR1NBQ8N0W7 255 aaPredicted RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 BAZ2AQ9UIF9 1905 aaKnown RBP22.9■■□□□ 1.26
MBD3-209ENST00000592012 AFF2P51816 1311 aa22.9■■□□□ 1.26
MBD3-209ENST00000592012 MYH13Q9UKX3 1938 aa22.89■■□□□ 1.26
MBD3-209ENST00000592012 NPHP1O15259 732 aa22.89■■□□□ 1.26
MBD3-209ENST00000592012 ESR2Q92731 530 aa22.89■■□□□ 1.26
MBD3-209ENST00000592012 SLC26A6Q9BXS9 759 aa22.89■■□□□ 1.26
MBD3-209ENST00000592012 IRS2Q9Y4H2 1338 aa22.89■■□□□ 1.25
MBD3-209ENST00000592012 SEPT12Q8IYM1 358 aa22.89■■□□□ 1.25
MBD3-209ENST00000592012 U2AF2P26368 475 aaKnown RBP eCLIP22.88■■□□□ 1.25
MBD3-209ENST00000592012 RCAN1P53805 252 aa22.88■■□□□ 1.25
MBD3-209ENST00000592012 RTN1Q16799 776 aa22.88■■□□□ 1.25
MBD3-209ENST00000592012 UBAC1Q9BSL1 405 aa22.88■■□□□ 1.25
MBD3-209ENST00000592012 ECM29Q5VYK3 1845 aa22.88■■□□□ 1.25
MBD3-209ENST00000592012 TNRC6CQ9HCJ0 1690 aaKnown RBP22.88■■□□□ 1.25
MBD3-209ENST00000592012 A0A1B0GVL5 298 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 ZBTB22O15209 634 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 CAVIN2O95810 425 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 ZNF165P49910 485 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 SEC23AQ15436 765 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 BCL11BQ9C0K0 894 aaPredicted RBP22.87■■□□□ 1.25
MBD3-209ENST00000592012 DNAJC25Q9H1X3 360 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 MYH2Q9UKX2 1941 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 FGRP09769 529 aa22.87■■□□□ 1.25
MBD3-209ENST00000592012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.87■■□□□ 1.25
MBD3-209ENST00000592012 CYP2D7A0A087X1C5 515 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 PRDX5P30044 214 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 HSPA1LP34931 641 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 NDUFA8P51970 172 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 TRIM29Q14134 588 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 SLC39A14Q15043 492 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 CTR9Q6PD62 1173 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 ZNF654Q8IZM8 581 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 MPNDQ8N594 471 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 FANCBQ8NB91 859 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 GUCY1A2P33402 732 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 CHAF1AQ13111 956 aaPredicted RBP22.86■■□□□ 1.25
MBD3-209ENST00000592012 AXDND1Q5T1B0 1012 aaPredicted RBP22.86■■□□□ 1.25
MBD3-209ENST00000592012 NBPF11Q86T75 865 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 WASF1Q92558 559 aa22.86■■□□□ 1.25
MBD3-209ENST00000592012 TNKSO95271 1327 aa22.85■■□□□ 1.25
MBD3-209ENST00000592012 CCDC196A0A1B0GTZ2 297 aa22.85■■□□□ 1.25
MBD3-209ENST00000592012 GRAPQ13588 217 aa22.85■■□□□ 1.25
MBD3-209ENST00000592012 GRAPLQ8TC17 118 aaPredicted RBP22.85■■□□□ 1.25
MBD3-209ENST00000592012 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.85■■□□□ 1.25
MBD3-209ENST00000592012 ADRA2BP18089 450 aa22.85■■□□□ 1.25
MBD3-209ENST00000592012 CRACR2BQ8N4Y2 399 aaPredicted RBP22.85■■□□□ 1.25
MBD3-209ENST00000592012 CNBD1Q8NA66 436 aa22.85■■□□□ 1.25
MBD3-209ENST00000592012 TDRD7Q8NHU6 1098 aaKnown RBP22.85■■□□□ 1.25
MBD3-209ENST00000592012 AATFQ9NY61 560 aaKnown RBP eCLIP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms