RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 CHST3Q7LGC8 479 aa12.43□□□□□ -0.42
LINC01539-205ENST00000591974 NECAB1Q8N987 351 aa12.43□□□□□ -0.42
LINC01539-205ENST00000591974 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
LINC01539-205ENST00000591974 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
LINC01539-205ENST00000591974 MKRN1Q9UHC7 482 aaKnown RBP12.43□□□□□ -0.42
LINC01539-205ENST00000591974 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 USP17L21D6R901 530 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 PFKFB2O60825 505 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 FGRP09769 529 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 USP5P45974 858 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 TNPO1Q92973 898 aaKnown RBP12.42□□□□□ -0.42
LINC01539-205ENST00000591974 ANGEL1Q9UNK9 670 aaKnown RBP12.42□□□□□ -0.42
LINC01539-205ENST00000591974 TTF2Q9UNY4 1162 aaKnown RBP12.42□□□□□ -0.42
LINC01539-205ENST00000591974 DAGLAQ9Y4D2 1042 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 TACC3Q9Y6A5 838 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 MYH8P13535 1937 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
LINC01539-205ENST00000591974 PTGER2P43116 358 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 NT5C2P49902 561 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
LINC01539-205ENST00000591974 DACT2Q5SW24 774 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 HHIPL2Q6UWX4 724 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 MRIQ9BWK5 157 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 ZSWIM5Q9P217 1185 aa12.42□□□□□ -0.42
LINC01539-205ENST00000591974 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
LINC01539-205ENST00000591974 SH2B2O14492 632 aaPredicted RBP12.41□□□□□ -0.42
LINC01539-205ENST00000591974 KDM4AO75164 1064 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 PDIA4P13667 645 aaKnown RBP12.41□□□□□ -0.42
LINC01539-205ENST00000591974 GJB2P29033 226 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 RHBDL3P58872 404 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 STK3Q13188 491 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
LINC01539-205ENST00000591974 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 AMOTL1Q8IY63 956 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 ESR2Q92731 530 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 LLPHQ9BRT6 129 aaKnown RBP12.41□□□□□ -0.42
LINC01539-205ENST00000591974 MCM9Q9NXL9 1143 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 ROBO3Q96MS0 1386 aa12.41□□□□□ -0.42
LINC01539-205ENST00000591974 ORC4O43929 436 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 PDIA3P30101 505 aaKnown RBP12.4□□□□□ -0.42
LINC01539-205ENST00000591974 LIFRP42702 1097 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
LINC01539-205ENST00000591974 SCRN1Q12765 414 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 PKP1Q13835 747 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 NBR1Q14596 966 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 IGDCC4Q8TDY8 1250 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 TGFBRAP1Q8WUH2 860 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 TEKT1Q969V4 418 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 KCNQ5Q9NR82 932 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 TCHHQ07283 1943 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 CYP2D7A0A087X1C5 515 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 F8W031 263 aaPredicted RBP12.4□□□□□ -0.42
LINC01539-205ENST00000591974 BRD1O95696 1058 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
LINC01539-205ENST00000591974 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 MXD3Q9BW11 206 aa12.4□□□□□ -0.42
LINC01539-205ENST00000591974 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
LINC01539-205ENST00000591974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01539-205ENST00000591974 FLT1P17948 1338 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
LINC01539-205ENST00000591974 COL4A5P29400 1685 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 KLF18A0A0U1RQI7 1052 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 YDJCA8MPS7 323 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 PDE4BQ07343 736 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 TMEM67Q5HYA8 995 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 LY9Q9HBG7 655 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
LINC01539-205ENST00000591974 ZDHHC9Q9Y397 364 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 MYO3BQ8WXR4 1341 aa12.39□□□□□ -0.43
LINC01539-205ENST00000591974 ERICH2A1L162 156 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 IFIT3O14879 490 aaKnown RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 PDCP20941 246 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 MAPKAPK5Q8IW41 473 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 TMTC2Q8N394 836 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 SMARCC2Q8TAQ2 1214 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 ZNF277Q9NRM2 450 aaPredicted RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 BRPF3Q9ULD4 1205 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 NAP1L2Q9ULW6 460 aaPredicted RBP12.38□□□□□ -0.43
LINC01539-205ENST00000591974 GOLGA8BA8MQT2 603 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 STX6O43752 255 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 CYP2D6P10635 497 aa12.38□□□□□ -0.43
LINC01539-205ENST00000591974 SYT1P21579 422 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms