RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 DUOX1Q9NRD9 1551 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 GOLGA8AA7E2F4 631 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 ORC4O43929 436 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 NPR1P16066 1061 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 PLCG2P16885 1265 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 IFNAR1P17181 557 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
VPS25-206ENST00000591584 PDE4BQ07343 736 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 CCDC173Q0VFZ6 552 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
VPS25-206ENST00000591584 ADGRA1Q86SQ6 560 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 TTC6Q86TZ1 520 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 CCDC24Q8N4L8 307 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 CHAMP1Q96JM3 812 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 NCOA5Q9HCD5 579 aaKnown RBP12.11□□□□□ -0.47
VPS25-206ENST00000591584 CD209Q9NNX6 404 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
VPS25-206ENST00000591584 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
VPS25-206ENST00000591584 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
VPS25-206ENST00000591584 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
VPS25-206ENST00000591584 SYCE3A1L190 88 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 MINDY4BA8MYZ0 360 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 GPSM2P81274 684 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 DDR1Q08345 913 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 SSRP1Q08945 709 aaKnown RBP12.1□□□□□ -0.47
VPS25-206ENST00000591584 TRIM29Q14134 588 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 TRIM22Q8IYM9 498 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
VPS25-206ENST00000591584 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 DCP1AQ9NPI6 582 aaPredicted RBP12.1□□□□□ -0.47
VPS25-206ENST00000591584 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
VPS25-206ENST00000591584 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
VPS25-206ENST00000591584 RTEL1Q9NZ71 1219 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 PARP3Q9Y6F1 533 aa12.1□□□□□ -0.47
VPS25-206ENST00000591584 CTAGE5O15320 804 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 UFL1O94874 794 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
VPS25-206ENST00000591584 KLRK1P26718 216 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
VPS25-206ENST00000591584 NTRK3Q16288 839 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 RTN1Q16799 776 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 RRP12Q5JTH9 1297 aaKnown RBP12.09□□□□□ -0.47
VPS25-206ENST00000591584 TXNRD3Q86VQ6 643 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
VPS25-206ENST00000591584 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 COA1Q9GZY4 146 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 COL4A1P02462 1669 aa12.09□□□□□ -0.47
VPS25-206ENST00000591584 WTIPA6NIX2 430 aaPredicted RBP12.08□□□□□ -0.48
VPS25-206ENST00000591584 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 USP17L21D6R901 530 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
VPS25-206ENST00000591584 DDAH1O94760 285 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 DEXIO95424 95 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 YEATS4O95619 227 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 CAVIN2O95810 425 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 XBP1P17861 261 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 PRDX5P30044 214 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
VPS25-206ENST00000591584 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS25-206ENST00000591584 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
VPS25-206ENST00000591584 FANCBQ8NB91 859 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 TBC1D16Q8TBP0 767 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 KCNG4Q8TDN1 519 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 PPP1R9BQ96SB3 815 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 AATFQ9NY61 560 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS25-206ENST00000591584 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
VPS25-206ENST00000591584 A0A1W2PQ27 194 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 A0A1W2PQ64 194 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 A0A1W2PQD8 194 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 SRGNP10124 158 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 SEC23AQ15436 765 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 HS1BP3Q53T59 392 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 EYA3Q99504 573 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 NUP62CLQ9H1M0 184 aa12.07□□□□□ -0.48
VPS25-206ENST00000591584 TFIP11Q9UBB9 837 aaKnown RBP12.07□□□□□ -0.48
VPS25-206ENST00000591584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.07□□□□□ -0.48
VPS25-206ENST00000591584 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 USP5P45974 858 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
VPS25-206ENST00000591584 MAP3K11Q16584 847 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 GRIPAP1Q4V328 841 aa12.06□□□□□ -0.48
VPS25-206ENST00000591584 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms