RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 PITPNM2Q9BZ72 1349 aa22■■□□□ 1.11
CROCCP3-205ENST00000591316 TOMM70O94826 608 aa21.99■■□□□ 1.11
CROCCP3-205ENST00000591316 VPS53Q5VIR6 699 aa21.99■■□□□ 1.11
CROCCP3-205ENST00000591316 PATL2C9JE40 543 aaKnown RBP21.99■■□□□ 1.11
CROCCP3-205ENST00000591316 FMR1Q06787 632 aaKnown RBP eCLIP21.99■■□□□ 1.11
CROCCP3-205ENST00000591316 FKBP1CQ5VVH2 108 aa21.99■■□□□ 1.11
CROCCP3-205ENST00000591316 FAM151AQ8WW52 585 aa21.99■■□□□ 1.11
CROCCP3-205ENST00000591316 FLT1P17948 1338 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 CCDC171Q6TFL3 1326 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 CNTNAP1P78357 1384 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 GSG1L2A8MUP6 293 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 TRAF5O00463 557 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 ENTPD3O75355 529 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 GNAT2P19087 354 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 MFAP1P55081 439 aaKnown RBP21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 FAM83AQ86UY5 434 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 OSBPL5Q9H0X9 879 aaPredicted RBP21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 DCP1AQ9NPI6 582 aaPredicted RBP21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 PALD1Q9ULE6 856 aa21.98■■□□□ 1.11
CROCCP3-205ENST00000591316 SGSM2O43147 1006 aa21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 CDAN1Q8IWY9 1227 aa21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 DDRGK1Q96HY6 314 aa21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 ESYT1Q9BSJ8 1104 aa21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 ATP8A2Q9NTI2 1148 aa21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 MCM9Q9NXL9 1143 aa21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 POLR2AP24928 1970 aaKnown RBP21.97■■□□□ 1.11
CROCCP3-205ENST00000591316 DDTLA6NHG4 134 aaPredicted RBP21.96■■□□□ 1.11
CROCCP3-205ENST00000591316 NBPF12Q5TAG4 269 aaPredicted RBP21.96■■□□□ 1.11
CROCCP3-205ENST00000591316 IFNL3Q8IZI9 196 aa21.96■■□□□ 1.11
CROCCP3-205ENST00000591316 SMC1BQ8NDV3 1235 aa21.96■■□□□ 1.11
CROCCP3-205ENST00000591316 POLR3DP05423 398 aaPredicted RBP21.95■■□□□ 1.11
CROCCP3-205ENST00000591316 HSPD1P10809 573 aaKnown RBP21.95■■□□□ 1.11
CROCCP3-205ENST00000591316 SH3BP5LQ7L8J4 393 aa21.95■■□□□ 1.11
CROCCP3-205ENST00000591316 ZNF408Q9H9D4 720 aa21.95■■□□□ 1.11
CROCCP3-205ENST00000591316 NPM3O75607 178 aaKnown RBP21.95■■□□□ 1.1
CROCCP3-205ENST00000591316 TDO2P48775 406 aa21.95■■□□□ 1.1
CROCCP3-205ENST00000591316 RBM46Q8TBY0 533 aaKnown RBP21.95■■□□□ 1.1
CROCCP3-205ENST00000591316 NACAP1Q9BZK3 213 aa21.95■■□□□ 1.1
CROCCP3-205ENST00000591316 MKRN1Q9UHC7 482 aaKnown RBP21.95■■□□□ 1.1
CROCCP3-205ENST00000591316 USP17L12C9JPN9 530 aa21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 USP17L21D6R901 530 aa21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 ITGBL1O95965 494 aaPredicted RBP21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 KIAA1211Q6ZU35 1233 aa21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 CDCA5Q96FF9 252 aa21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 EPB41L4AQ9HCS5 686 aaPredicted RBP21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 RAD50Q92878 1312 aa21.94■■□□□ 1.1
CROCCP3-205ENST00000591316 CYP2D7A0A087X1C5 515 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 MINDY4BA8MYZ0 360 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 FOXP2O15409 715 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 SLURP2P0DP57 97 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 PRKG1Q13976 671 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 MIGA2Q7L4E1 593 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 TEPSINQ96N21 525 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 CSRNP1Q96S65 589 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 NAPBQ9H115 298 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 PPP2R3BQ9Y5P8 575 aa21.93■■□□□ 1.1
CROCCP3-205ENST00000591316 FGAP02671 866 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 CYP2D6P10635 497 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 PLCD1P51178 756 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 PTH1RQ03431 593 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 CTR9Q6PD62 1173 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 STK11IPQ8N1F8 1099 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 ANO2Q9NQ90 1003 aa21.92■■□□□ 1.1
CROCCP3-205ENST00000591316 EVX2Q03828 476 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 SUPT20HL1Q3ZLR7 823 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 GIMAP6Q6P9H5 292 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 DHX36Q9H2U1 1008 aaKnown RBP21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 FZD1Q9UP38 647 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 ECM29Q5VYK3 1845 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 SMIM22K7EJ46 135 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 AMOTL1Q8IY63 956 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 PI4KBQ9UBF8 816 aa21.91■■□□□ 1.1
CROCCP3-205ENST00000591316 HLA-DOAP06340 250 aa21.9■■□□□ 1.1
CROCCP3-205ENST00000591316 TTC6Q86TZ1 520 aa21.9■■□□□ 1.1
CROCCP3-205ENST00000591316 DSCC1Q9BVC3 393 aa21.9■■□□□ 1.1
CROCCP3-205ENST00000591316 RPAP1Q9BWH6 1393 aaPredicted RBP21.9■■□□□ 1.1
CROCCP3-205ENST00000591316 CELF2O95319 508 aaKnown RBP21.89■■□□□ 1.09
CROCCP3-205ENST00000591316 NF2P35240 595 aa21.89■■□□□ 1.09
CROCCP3-205ENST00000591316 TTLL12Q14166 644 aaPredicted RBP21.89■■□□□ 1.09
CROCCP3-205ENST00000591316 FAM196BA6NMK8 535 aa21.88■■□□□ 1.09
CROCCP3-205ENST00000591316 FSTL1Q12841 308 aa21.88■■□□□ 1.09
CROCCP3-205ENST00000591316 C12orf60Q5U649 245 aa21.88■■□□□ 1.09
CROCCP3-205ENST00000591316 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
CROCCP3-205ENST00000591316 ALX1Q15699 326 aa21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 FOXP4Q8IVH2 680 aaPredicted RBP21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 DYNLL2Q96FJ2 89 aa21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 TRIM34Q9BYJ4 488 aa21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 LSG1Q9H089 658 aaKnown RBP21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 ARPP21Q9UBL0 812 aaPredicted RBP21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 ATRNL1Q5VV63 1379 aa21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 HAND2P61296 217 aa21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 SBK1Q52WX2 424 aa21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.87■■□□□ 1.09
CROCCP3-205ENST00000591316 PPP1R12BO60237 982 aaPredicted RBP21.86■■□□□ 1.09
CROCCP3-205ENST00000591316 CST9Q5W186 159 aa21.86■■□□□ 1.09
CROCCP3-205ENST00000591316 MOB2Q70IA6 237 aa21.86■■□□□ 1.09
CROCCP3-205ENST00000591316 MAP4K1Q92918 833 aa21.86■■□□□ 1.09
CROCCP3-205ENST00000591316 HOOK2Q96ED9 719 aa21.86■■□□□ 1.09
CROCCP3-205ENST00000591316 SERPINB13Q9UIV8 391 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms