RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 AATFQ9NY61 560 aaKnown RBP eCLIP22.37■■□□□ 1.17
LDLRAD4-215ENST00000590371 RFX7Q2KHR2 1363 aa22.37■■□□□ 1.17
LDLRAD4-215ENST00000590371 SMARCA5O60264 1052 aaPredicted RBP22.36■■□□□ 1.17
LDLRAD4-215ENST00000590371 PLCG2P16885 1265 aa22.36■■□□□ 1.17
LDLRAD4-215ENST00000590371 MAP3K12Q12852 859 aa22.36■■□□□ 1.17
LDLRAD4-215ENST00000590371 TTF1Q15361 905 aaPredicted RBP22.36■■□□□ 1.17
LDLRAD4-215ENST00000590371 ZKSCAN4Q969J2 545 aaPredicted RBP22.36■■□□□ 1.17
LDLRAD4-215ENST00000590371 DNAJC2Q99543 621 aaKnown RBP22.36■■□□□ 1.17
LDLRAD4-215ENST00000590371 CYP7A1P22680 504 aa22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 GJA5P36382 358 aa22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 INHBEP58166 350 aa22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 SH3RF3Q8TEJ3 882 aaPredicted RBP22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 OTUD5Q96G74 571 aa22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 ANTXR1Q9H6X2 564 aa22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 CASP8AP2Q9UKL3 1982 aa22.35■■□□□ 1.17
LDLRAD4-215ENST00000590371 MAGEB6Q8N7X4 407 aa22.34■■□□□ 1.17
LDLRAD4-215ENST00000590371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.34■■□□□ 1.17
LDLRAD4-215ENST00000590371 DCTPP1Q9H773 170 aa22.34■■□□□ 1.17
LDLRAD4-215ENST00000590371 PCDHB15Q9Y5E8 787 aa22.34■■□□□ 1.17
LDLRAD4-215ENST00000590371 DDTLA6NHG4 134 aaPredicted RBP22.33■■□□□ 1.17
LDLRAD4-215ENST00000590371 INPP5BP32019 993 aa22.33■■□□□ 1.17
LDLRAD4-215ENST00000590371 ADGRA1Q86SQ6 560 aa22.33■■□□□ 1.17
LDLRAD4-215ENST00000590371 CNKSR2Q8WXI2 1034 aa22.33■■□□□ 1.17
LDLRAD4-215ENST00000590371 SNCAIPQ9Y6H5 919 aa22.33■■□□□ 1.17
LDLRAD4-215ENST00000590371 GOLIM4O00461 696 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 NPM3O75607 178 aaKnown RBP22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 TBC1D8O95759 1140 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 ALDH1A1P00352 501 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 AAMPQ13685 434 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 OTUD7BQ6GQQ9 843 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 SH3BP5LQ7L8J4 393 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 ERO1BQ86YB8 467 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 BOLA2Q9H3K6 86 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 LAMB1P07942 1786 aa22.32■■□□□ 1.16
LDLRAD4-215ENST00000590371 SPDYE5A6NIY4 337 aa22.31■■□□□ 1.16
LDLRAD4-215ENST00000590371 PPP4CP60510 307 aa22.31■■□□□ 1.16
LDLRAD4-215ENST00000590371 IFFO2Q5TF58 517 aa22.31■■□□□ 1.16
LDLRAD4-215ENST00000590371 IFNL1Q8IU54 200 aa22.31■■□□□ 1.16
LDLRAD4-215ENST00000590371 ATP5JP18859 108 aa22.3■■□□□ 1.16
LDLRAD4-215ENST00000590371 GTF2A2P52657 109 aa22.3■■□□□ 1.16
LDLRAD4-215ENST00000590371 MIGA1Q8NAN2 632 aa22.3■■□□□ 1.16
LDLRAD4-215ENST00000590371 TGFBRAP1Q8WUH2 860 aa22.3■■□□□ 1.16
LDLRAD4-215ENST00000590371 GPATCH3Q96I76 525 aa22.3■■□□□ 1.16
LDLRAD4-215ENST00000590371 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
LDLRAD4-215ENST00000590371 CDK5RAP2Q96SN8 1893 aa22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 DYNLL1P63167 89 aaKnown RBP22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 TMED8Q6PL24 325 aaPredicted RBP22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 MAPKAPK5Q8IW41 473 aa22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 PAG1Q9NWQ8 432 aa22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
LDLRAD4-215ENST00000590371 COL2A1P02458 1487 aaPredicted RBP22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 ATRNL1Q5VV63 1379 aa22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 CCL15-CCL14A0A0B4J2E2 113 aa22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 IGF2BP3O00425 579 aaKnown RBP eCLIP22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 PPIL2Q13356 520 aa22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 CCL15Q16663 113 aa22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 SLC9C2Q5TAH2 1124 aa22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.28■■□□□ 1.161e-7■■■■■ 34.8
LDLRAD4-215ENST00000590371 FOCADQ5VW36 1801 aa22.28■■□□□ 1.16
LDLRAD4-215ENST00000590371 USP5P45974 858 aa22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 PPATQ06203 517 aa22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 NOL9Q5SY16 702 aaKnown RBP22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 EDC3Q96F86 508 aaKnown RBP22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 PICK1Q9NRD5 415 aa22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 ECHDC1Q9NTX5 307 aa22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 FLT1P17948 1338 aa22.27■■□□□ 1.16
LDLRAD4-215ENST00000590371 IRF6O14896 467 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 PDE6AP16499 860 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 SNAPC2Q13487 334 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 SCYL3Q8IZE3 742 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 MS4A4AQ96JQ5 239 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 HAUS7Q99871 368 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 TRIM34Q9BYJ4 488 aa22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 DHX36Q9H2U1 1008 aaKnown RBP22.26■■□□□ 1.15
LDLRAD4-215ENST00000590371 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 TESPA1A2RU30 521 aaPredicted RBP22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 FAM196BA6NMK8 535 aa22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 PHF20L1A8MW92 1017 aa22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 SLURP2P0DP57 97 aa22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 CETPP11597 493 aa22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 BRI3BPQ8WY22 251 aa22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.25■■□□□ 1.15
LDLRAD4-215ENST00000590371 DOCK1Q14185 1865 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 TBC1D12O60347 775 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 CAPN15O75808 1086 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 MAP3K10Q02779 954 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 DGKZQ13574 1117 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 CRACR2BQ8N4Y2 399 aaPredicted RBP22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 PTPN18Q99952 460 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 CFHR5Q9BXR6 569 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 SAP30BPQ9UHR5 308 aaKnown RBP22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 ZNF532Q9HCE3 1301 aa22.24■■□□□ 1.15
LDLRAD4-215ENST00000590371 MYH1P12882 1939 aa22.23■■□□□ 1.15
LDLRAD4-215ENST00000590371 GPR25O00155 361 aa22.23■■□□□ 1.15
LDLRAD4-215ENST00000590371 CTNND1O60716 968 aaKnown RBP22.23■■□□□ 1.15
LDLRAD4-215ENST00000590371 HLA-DOAP06340 250 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms