RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 FOCADQ5VW36 1801 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
NFIX-212ENST00000590027 LDHCP07864 332 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 ZAP70P43403 619 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 GTF2A2P52657 109 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 CCL15Q16663 113 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 SH3BP5LQ7L8J4 393 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 AACSQ86V21 672 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 ERO1BQ86YB8 467 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 SIRT2Q8IXJ6 389 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
NFIX-212ENST00000590027 IL1RAPL2Q9NP60 686 aa18.44■□□□□ 0.54
NFIX-212ENST00000590027 DDTLA6NHG4 134 aaPredicted RBP18.43■□□□□ 0.54
NFIX-212ENST00000590027 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
NFIX-212ENST00000590027 HMMRO75330 724 aa18.43■□□□□ 0.54
NFIX-212ENST00000590027 CRHR2Q13324 411 aa18.43■□□□□ 0.54
NFIX-212ENST00000590027 PPIL2Q13356 520 aa18.43■□□□□ 0.54
NFIX-212ENST00000590027 OTUD7BQ6GQQ9 843 aa18.43■□□□□ 0.54
NFIX-212ENST00000590027 ZSCAN29Q8IWY8 852 aaPredicted RBP18.43■□□□□ 0.54
NFIX-212ENST00000590027 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.43■□□□□ 0.54
NFIX-212ENST00000590027 PIH1D3Q9NQM4 214 aaKnown RBP18.43■□□□□ 0.54
NFIX-212ENST00000590027 ZNF112Q9UJU3 913 aa18.43■□□□□ 0.54
NFIX-212ENST00000590027 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 COL2A1P02458 1487 aaPredicted RBP18.42■□□□□ 0.54
NFIX-212ENST00000590027 APBB1O00213 710 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 IRF6O14896 467 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 FKTNO75072 461 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 SLURP2P0DP57 97 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
NFIX-212ENST00000590027 RHPN1Q8TCX5 695 aa18.42■□□□□ 0.54
NFIX-212ENST00000590027 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
NFIX-212ENST00000590027 NOL9Q5SY16 702 aaKnown RBP18.41■□□□□ 0.54
NFIX-212ENST00000590027 NDUFB9Q9Y6M9 179 aa18.41■□□□□ 0.54
NFIX-212ENST00000590027 ATAD5Q96QE3 1844 aa18.41■□□□□ 0.54
NFIX-212ENST00000590027 PPATQ06203 517 aa18.4■□□□□ 0.54
NFIX-212ENST00000590027 ADGRA1Q86SQ6 560 aa18.4■□□□□ 0.54
NFIX-212ENST00000590027 TEX11Q8IYF3 940 aa18.4■□□□□ 0.54
NFIX-212ENST00000590027 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
NFIX-212ENST00000590027 SH3RF3Q8TEJ3 882 aaPredicted RBP18.4■□□□□ 0.54
NFIX-212ENST00000590027 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
NFIX-212ENST00000590027 NOL10Q9BSC4 688 aaKnown RBP18.4■□□□□ 0.54
NFIX-212ENST00000590027 AATFQ9NY61 560 aaKnown RBP eCLIP18.4■□□□□ 0.54
NFIX-212ENST00000590027 PTPRFP10586 1907 aa18.4■□□□□ 0.54
NFIX-212ENST00000590027 PHIPQ8WWQ0 1821 aa18.39■□□□□ 0.54
NFIX-212ENST00000590027 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
NFIX-212ENST00000590027 MAP4K4O95819 1239 aaPredicted RBP18.39■□□□□ 0.53
NFIX-212ENST00000590027 CETPP11597 493 aa18.39■□□□□ 0.53
NFIX-212ENST00000590027 SNAPC2Q13487 334 aa18.39■□□□□ 0.53
NFIX-212ENST00000590027 TAF1CQ15572 869 aaPredicted RBP18.39■□□□□ 0.53
NFIX-212ENST00000590027 OSBPL5Q9H0X9 879 aaPredicted RBP18.39■□□□□ 0.53
NFIX-212ENST00000590027 PHF20L1A8MW92 1017 aa18.38■□□□□ 0.53
NFIX-212ENST00000590027 SCYL3Q8IZE3 742 aa18.38■□□□□ 0.53
NFIX-212ENST00000590027 FAM196BA6NMK8 535 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 BTBD19C9JJ37 291 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
NFIX-212ENST00000590027 MAP3K10Q02779 954 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 CLASRPQ8N2M8 674 aaKnown RBP18.37■□□□□ 0.53
NFIX-212ENST00000590027 BCL11AQ9H165 835 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 ANTXR1Q9H6X2 564 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 KCNH4Q9UQ05 1017 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 ZSWIM8A7E2V4 1837 aa18.37■□□□□ 0.53
NFIX-212ENST00000590027 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 BAG3O95817 575 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 PLCG2P16885 1265 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 FLT1P17948 1338 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 CD99L2Q8TCZ2 262 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 ZFYVE28Q9HCC9 887 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.36■□□□□ 0.53
NFIX-212ENST00000590027 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
NFIX-212ENST00000590027 DDX60LQ5H9U9 1706 aaKnown RBP18.35■□□□□ 0.53
NFIX-212ENST00000590027 IGSF3O75054 1194 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 CYP7A1P22680 504 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 PPP4CP60510 307 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 DYNLL1P63167 89 aaKnown RBP18.35■□□□□ 0.53
NFIX-212ENST00000590027 PKN2Q16513 984 aaKnown RBP18.35■□□□□ 0.53
NFIX-212ENST00000590027 MAPKAPK5Q8IW41 473 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 ERO1AQ96HE7 468 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 PICK1Q9NRD5 415 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 HTTP42858 3142 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 MYH1P12882 1939 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 NAV1Q8NEY1 1877 aa18.35■□□□□ 0.53
NFIX-212ENST00000590027 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
NFIX-212ENST00000590027 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
NFIX-212ENST00000590027 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
NFIX-212ENST00000590027 TGFBRAP1Q8WUH2 860 aa18.34■□□□□ 0.53
NFIX-212ENST00000590027 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
NFIX-212ENST00000590027 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.34■□□□□ 0.53
NFIX-212ENST00000590027 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
NFIX-212ENST00000590027 TRIM17Q9Y577 477 aa18.34■□□□□ 0.53
NFIX-212ENST00000590027 TBC1D12O60347 775 aa18.33■□□□□ 0.52
NFIX-212ENST00000590027 PTPRAP18433 802 aa18.33■□□□□ 0.52
NFIX-212ENST00000590027 CAP1Q01518 475 aa18.33■□□□□ 0.52
NFIX-212ENST00000590027 SP3Q02447 781 aa18.33■□□□□ 0.52
NFIX-212ENST00000590027 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
NFIX-212ENST00000590027 MOGSQ13724 837 aa18.33■□□□□ 0.52
NFIX-212ENST00000590027 OTOP1Q7RTM1 612 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms