RNA–Protein interactions for RNA: ENST00000589695.1

TREM1-205, Transcript of triggering receptor expressed on myeloid cells 1, human

TSL 2

Gene TREM1, Length 519 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TREM1-205	ENST00000589695	RGS3	P49796	1198 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	TCP10	Q12799	353 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	CRHR2	Q13324	411 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	PPIL2	Q13356	520 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	MOGS	Q13724	837 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	FBXO46	Q6PJ61	603 aa	Predicted RBP	6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	ERICH6	Q7L0X2	663 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	ITPRIP	Q8IWB1	547 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	SIRT2	Q8IXJ6	389 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	RPAP2	Q8IXW5	612 aa	Predicted RBP	6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	FAM43A	Q8N2R8	423 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	WRNIP1	Q96S55	665 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	DBNDD2	Q9BQY9	259 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	C1orf115	Q9H7X2	142 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	DDX4	Q9NQI0	724 aa	Known RBP	6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	ABCF2	Q9UG63	623 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	DBNL	Q9UJU6	430 aa	Known RBP	6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	KCNH4	Q9UQ05	1017 aa		6.23	□□□□□ -1.41
TREM1-205	ENST00000589695	CCL15-CCL14	A0A0B4J2E2	113 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	DDTL	A6NHG4	134 aa	Predicted RBP	6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	BTBD19	C9JJ37	291 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	CXCL11	O14625	94 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	CETP	P11597	493 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	GSTO1	P78417	241 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	CAP1	Q01518	475 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	SNAPC2	Q13487	334 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	PDE3A	Q14432	1141 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	CCL15	Q16663	113 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	CCDC158	Q5M9N0	1113 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	GORAB	Q5T7V8	394 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	TMED8	Q6PL24	325 aa	Predicted RBP	6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	METTL16	Q86W50	562 aa	Known RBP	6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	DZIP1	Q86YF9	867 aa	Known RBP	6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	OTUD5	Q96G74	571 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	RCAN3	Q9UKA8	241 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	HPS5	Q9UPZ3	1129 aa		6.22	□□□□□ -1.41
TREM1-205	ENST00000589695	TLR2	O60603	784 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	CTNND1	O60716	968 aa	Known RBP	6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	PTPRA	P18433	802 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	SP3	Q02447	781 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	OTOP1	Q7RTM1	612 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	ANKRD23	Q86SG2	305 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	ADGRA1	Q86SQ6	560 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	ERC1	Q8IUD2	1116 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	SCYL3	Q8IZE3	742 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	ERO1A	Q96HE7	468 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	ZFYVE28	Q9HCC9	887 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	SNRK	Q9NRH2	765 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	TLR7	Q9NYK1	1049 aa	Known RBP	6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	RAI14	Q9P0K7	980 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	LRP2BP	Q9P2M1	347 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	DDX19B	Q9UMR2	479 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	PTPN22	Q9Y2R2	807 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	AFG3L2	Q9Y4W6	797 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	ADGRA2	Q96PE1	1338 aa		6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	COL2A1	P02458	1487 aa	Predicted RBP	6.21	□□□□□ -1.42
TREM1-205	ENST00000589695	OTOF	Q9HC10	1997 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	SLURP2	P0DP57	97 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	ZAP70	P43403	619 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	MLLT1	Q03111	559 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	OS9	Q13438	667 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	HSP90AB4P	Q58FF6	505 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	TTC39A	Q5SRH9	613 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	NAA16	Q6N069	864 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	GPAT2	Q6NUI2	795 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	C17orf99	Q6UX52	265 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	RHPN1	Q8TCX5	695 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	DHX36	Q9H2U1	1008 aa	Known RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	CHMP4B	Q9H444	224 aa	Known RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	PIH1D3	Q9NQM4	214 aa	Known RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	EXOC6B	Q9Y2D4	811 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	COG6	Q9Y2V7	657 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	SLC45A1	Q9Y2W3	748 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695	ZHX2	Q9Y6X8	837 aa		6.2	□□□□□ -1.42
TREM1-205	ENST00000589695		A0A0G2JLL6	359 aa	Predicted RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	PDHX	O00330	501 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	RAB11FIP3	O75154	756 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	BAG3	O95817	575 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	GNRH1	P01148	92 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	PLCG2	P16885	1265 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	PICALM	Q13492	652 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	RRP1B	Q14684	758 aa	Known RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	TAF1C	Q15572	869 aa	Predicted RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	C20orf194	Q5TEA3	1177 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	FASTKD5	Q7L8L6	764 aa	Known RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	CD99L2	Q8TCZ2	262 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	ARMC5	Q96C12	935 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	ANTXR1	Q9H6X2	564 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	EFCC1	Q9HA90	598 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	PI4KB	Q9UBF8	816 aa		6.19	□□□□□ -1.42
TREM1-205	ENST00000589695	HERC5	Q9UII4	1024 aa	Known RBP	6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms