RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 ITGB4P16144 1822 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 WASLO00401 505 aaPredicted RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 AP5Z1O43299 807 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 FOXO3O43524 673 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ICMTO60725 284 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 PPFIA4O75335 1185 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 LRMPQ12912 555 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 SNW1Q13573 536 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 DCTN1Q14203 1278 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 EIF4A2Q14240 407 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 KRT32Q14532 448 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ZRSR1Q15695 479 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ELF2Q15723 593 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 KRT24Q2M2I5 525 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 KMT5BQ4FZB7 885 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 C4orf46Q504U0 113 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 FAM182BQ5T319 152 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 TSHZ3Q63HK5 1081 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 SULT6B1Q6IMI4 303 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 CTR9Q6PD62 1173 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 FBXO38Q6PIJ6 1188 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 TMCO3Q6UWJ1 677 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 CCDC73Q6ZRK6 1079 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 DEFB132Q7Z7B7 95 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 TTC6Q86TZ1 520 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 NME9Q86XW9 330 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ERC1Q8IUD2 1116 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 LRRC8AQ8IWT6 810 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 CEP57L1Q8IYX8 460 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 RGL4Q8IZJ4 473 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 CCAR2Q8N163 923 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 GOLGA6L1Q8N7Z2 621 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 SSH3Q8TE77 659 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 PMM1Q92871 262 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 VTI1AQ96AJ9 217 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 CHMP4CQ96CF2 233 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ZFRQ96KR1 1074 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 SPOCK3Q9BQ16 436 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 OSBPL2Q9H1P3 480 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ALDH8A1Q9H2A2 487 aaPredicted RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ZSCAN16Q9H4T2 348 aaPredicted RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 PIF1Q9H611 641 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ZSWIM4Q9H7M6 989 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 CCSER2Q9H7U1 834 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 PCDH12Q9NPG4 1184 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 TYW1Q9NV66 732 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ANO10Q9NW15 660 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 DACT1Q9NYF0 836 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 FAM53CQ9NYF3 392 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 HMG20BQ9P0W2 317 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 USP21Q9UK80 565 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 ZNF215Q9UL58 517 aaPredicted RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 NAP1L2Q9ULW6 460 aaPredicted RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 COL4A3BPQ9Y5P4 624 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 LRRFIP2Q9Y608 721 aaKnown RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 V9GYY5 206 aaPredicted RBP3.89□□□□□ -1.79
LINC01539-203ENST00000589447 RFX7Q2KHR2 1363 aa3.89□□□□□ -1.79
LINC01539-203ENST00000589447 KAT6BQ8WYB5 2073 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 DISP2A7MBM2 1401 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 COL5A2P05997 1499 aaPredicted RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 KIAA1551Q9HCM1 1747 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 PNMA6EA0A0J9YXQ4 647 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 GOLGA6L9A6NEM1 432 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 ERICH4A6NGS2 130 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CCDC69A6NI79 296 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 F6X3S4 739 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 H3BQV1 296 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 TULP2O00295 520 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 ENPP3O14638 875 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 KINO60870 393 aaKnown RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 SURF6O75683 361 aaKnown RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 LARGE1O95461 756 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 SKILP12757 684 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CD46P15529 392 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 H2AFXP16104 143 aaPredicted RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 LIG1P18858 919 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 MAPK1P28482 360 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CYP2C19P33261 490 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 APLP1P51693 650 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 OS9Q13438 667 aaPredicted RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CAMK4Q16566 473 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 PLEKHG6Q3KR16 790 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 MUM1L1Q5H9M0 696 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 C9orf131Q5VYM1 1079 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 ATL3Q6DD88 541 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 PRPF40BQ6NWY9 871 aaKnown RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 BLOC1S2Q6QNY1 142 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CWC27Q6UX04 472 aaKnown RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 TSHZ1Q6ZSZ6 1077 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CDC37L1Q7L3B6 337 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 MCM10Q7L590 875 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 NUTM1Q86Y26 1132 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 UNC5CLQ8IV45 518 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CKAP2LQ8IYA6 745 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CLASRPQ8N2M8 674 aaKnown RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 MNS1Q8NEH6 495 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 PI4K2BQ8TCG2 481 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 RHPN1Q8TCX5 695 aa3.88□□□□□ -1.79
LINC01539-203ENST00000589447 CACTINQ8WUQ7 758 aaKnown RBP3.88□□□□□ -1.79
LINC01539-203ENST00000589447 LEO1Q8WVC0 666 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms