RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 UBAP2LQ14157 1087 aaKnown RBP10.84□□□□□ -0.67
DNMT1-219ENST00000589349 DCTN1Q14203 1278 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 GAS6Q14393 721 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 HIF1AQ16665 826 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 RNFT1Q5M7Z0 435 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 ALDH16A1Q8IZ83 802 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 ZCCHC2Q9C0B9 1178 aaKnown RBP10.84□□□□□ -0.67
DNMT1-219ENST00000589349 PNNQ9H307 717 aaKnown RBP10.84□□□□□ -0.67
DNMT1-219ENST00000589349 MBIPQ9NS73 344 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 NSFL1CQ9UNZ2 370 aaKnown RBP10.84□□□□□ -0.67
DNMT1-219ENST00000589349 PCDHGC4Q9Y5F7 938 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 QSER1Q2KHR3 1735 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 A0A0G2JLW4 131 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 ATXN7O15265 892 aaPredicted RBP10.83□□□□□ -0.68
DNMT1-219ENST00000589349 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
DNMT1-219ENST00000589349 GYS1P13807 737 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 YBX3P16989 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
DNMT1-219ENST00000589349 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 USPL1Q5W0Q7 1092 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 INTS5Q6P9B9 1019 aaKnown RBP10.83□□□□□ -0.68
DNMT1-219ENST00000589349 ZNF790Q6PG37 636 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
DNMT1-219ENST00000589349 ANKIB1Q9P2G1 1089 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 BCS1LQ9Y276 419 aa10.83□□□□□ -0.68
DNMT1-219ENST00000589349 PRMT3O60678 531 aa10.82□□□□□ -0.68
DNMT1-219ENST00000589349 RALBP1Q15311 655 aa10.82□□□□□ -0.68
DNMT1-219ENST00000589349 RTN1Q16799 776 aa10.82□□□□□ -0.68
DNMT1-219ENST00000589349 ZNF496Q96IT1 587 aaPredicted RBP10.82□□□□□ -0.68
DNMT1-219ENST00000589349 PRIMPOLQ96LW4 560 aa10.82□□□□□ -0.68
DNMT1-219ENST00000589349 ZBTB1Q9Y2K1 713 aa10.82□□□□□ -0.68
DNMT1-219ENST00000589349 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-219ENST00000589349 A0A087WZG4 1122 aa10.81□□□□□ -0.68
DNMT1-219ENST00000589349 KCNQ3O43525 872 aa10.81□□□□□ -0.68
DNMT1-219ENST00000589349 MX2P20592 715 aa10.81□□□□□ -0.68
DNMT1-219ENST00000589349 SRSF11Q05519 484 aaKnown RBP10.81□□□□□ -0.68
DNMT1-219ENST00000589349 ZNF526Q8TF50 670 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-219ENST00000589349 C7orf43Q8WVR3 580 aa10.81□□□□□ -0.68
DNMT1-219ENST00000589349 TEX13AQ9BXU3 409 aaPredicted RBP10.81□□□□□ -0.68
DNMT1-219ENST00000589349 NDFIP2Q9NV92 336 aa10.81□□□□□ -0.68
DNMT1-219ENST00000589349 MIS18AQ9NYP9 233 aa10.81□□□□□ -0.68
DNMT1-219ENST00000589349 BNIP3LO60238 219 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 A1BGP04217 495 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 FAM157BP0CG42 384 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 WDR43Q15061 677 aaKnown RBP eCLIP10.8□□□□□ -0.68
DNMT1-219ENST00000589349 OCLNQ16625 522 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 ARHGAP27Q6ZUM4 889 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 ABHD17AQ96GS6 310 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 UBR3Q6ZT12 1888 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 USP42Q9H9J4 1324 aaKnown RBP10.8□□□□□ -0.68
DNMT1-219ENST00000589349 SCN11AQ9UI33 1791 aa10.8□□□□□ -0.68
DNMT1-219ENST00000589349 DPEP1P16444 411 aa10.79□□□□□ -0.68
DNMT1-219ENST00000589349 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-219ENST00000589349 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-219ENST00000589349 TAF7Q15545 349 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-219ENST00000589349 NGEFQ8N5V2 710 aa10.79□□□□□ -0.68
DNMT1-219ENST00000589349 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
DNMT1-219ENST00000589349 CXXC1Q9P0U4 656 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-219ENST00000589349 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
DNMT1-219ENST00000589349 COL15A1P39059 1388 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 HEG1Q9ULI3 1381 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 KHNYNO15037 678 aaKnown RBP10.78□□□□□ -0.68
DNMT1-219ENST00000589349 SNRPA1P09661 255 aaKnown RBP10.78□□□□□ -0.68
DNMT1-219ENST00000589349 SLURP2P0DP57 97 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 FGFR3P22607 806 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 MAP2K3P46734 347 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 TGFB2P61812 414 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 FKBP5Q13451 457 aaPredicted RBP10.78□□□□□ -0.68
DNMT1-219ENST00000589349 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 THUMPD2Q9BTF0 503 aaKnown RBP10.78□□□□□ -0.68
DNMT1-219ENST00000589349 NARFQ9UHQ1 456 aa10.78□□□□□ -0.68
DNMT1-219ENST00000589349 LAS1LQ9Y4W2 734 aaKnown RBP10.78□□□□□ -0.68
DNMT1-219ENST00000589349 CICQ96RK0 1608 aaPredicted RBP10.77□□□□□ -0.68
DNMT1-219ENST00000589349 DCDC2BA2VCK2 349 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 HTATSF1O43719 755 aaKnown RBP10.77□□□□□ -0.69
DNMT1-219ENST00000589349 TNP2Q05952 138 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 LAMC2Q13753 1193 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 NFE2L2Q16236 605 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 COL26A1Q96A83 441 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 SUSD3Q96L08 255 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 PIM2Q9P1W9 311 aa10.77□□□□□ -0.69
DNMT1-219ENST00000589349 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
DNMT1-219ENST00000589349 MYBBP1AQ9BQG0 1328 aaKnown RBP10.77□□□□□ -0.69
DNMT1-219ENST00000589349 PRAMEF22A3QJZ6 481 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 SERPINB2P05120 415 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 MAPTP10636 758 aaKnown RBP10.76□□□□□ -0.69
DNMT1-219ENST00000589349 ATP2B4P23634 1241 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 CHRNA5P30532 468 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 RIPK4P57078 832 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 DDR1Q08345 913 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 NFIXQ14938 502 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 DALRD3Q5D0E6 543 aaKnown RBP10.76□□□□□ -0.69
DNMT1-219ENST00000589349 PNISRQ8TF01 805 aaKnown RBP10.76□□□□□ -0.69
DNMT1-219ENST00000589349 HSH2DQ96JZ2 352 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 USP16Q9Y5T5 823 aa10.76□□□□□ -0.69
DNMT1-219ENST00000589349 MRC1P22897 1456 aa10.75□□□□□ -0.69
DNMT1-219ENST00000589349 TMEM88BA6NKF7 163 aa10.75□□□□□ -0.69
DNMT1-219ENST00000589349 FAM177BA6PVY3 158 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms