RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 ZNF112Q9UJU3 913 aa25.37■■□□□ 1.65
MBD3-205ENST00000589064 TESPA1A2RU30 521 aaPredicted RBP25.36■■□□□ 1.65
MBD3-205ENST00000589064 SPDYE5A6NIY4 337 aa25.36■■□□□ 1.65
MBD3-205ENST00000589064 GPR25O00155 361 aa25.36■■□□□ 1.65
MBD3-205ENST00000589064 ERO1BQ86YB8 467 aa25.36■■□□□ 1.65
MBD3-205ENST00000589064 ZNF296Q8WUU4 475 aaPredicted RBP25.36■■□□□ 1.65
MBD3-205ENST00000589064 DDTLA6NHG4 134 aaPredicted RBP25.35■■□□□ 1.65
MBD3-205ENST00000589064 CLASRPQ8N2M8 674 aaKnown RBP25.35■■□□□ 1.65
MBD3-205ENST00000589064 CFHR5Q9BXR6 569 aa25.35■■□□□ 1.65
MBD3-205ENST00000589064 NDUFB9Q9Y6M9 179 aa25.35■■□□□ 1.65
MBD3-205ENST00000589064 RAB11FIP3O75154 756 aa25.34■■□□□ 1.65
MBD3-205ENST00000589064 GTF2A2P52657 109 aa25.34■■□□□ 1.65
MBD3-205ENST00000589064 OTUD7BQ6GQQ9 843 aa25.34■■□□□ 1.65
MBD3-205ENST00000589064 CASP8AP2Q9UKL3 1982 aa25.34■■□□□ 1.65
MBD3-205ENST00000589064 RFX7Q2KHR2 1363 aa25.34■■□□□ 1.65
MBD3-205ENST00000589064 MAP4K4O95819 1239 aaPredicted RBP25.34■■□□□ 1.65
MBD3-205ENST00000589064 BRI3BPQ8WY22 251 aa25.34■■□□□ 1.65
MBD3-205ENST00000589064 CCL15-CCL14A0A0B4J2E2 113 aa25.33■■□□□ 1.65
MBD3-205ENST00000589064 SLURP2P0DP57 97 aa25.33■■□□□ 1.65
MBD3-205ENST00000589064 CCL15Q16663 113 aa25.33■■□□□ 1.65
MBD3-205ENST00000589064 SH3RF3Q8TEJ3 882 aaPredicted RBP25.33■■□□□ 1.65
MBD3-205ENST00000589064 NOL10Q9BSC4 688 aaKnown RBP25.33■■□□□ 1.65
MBD3-205ENST00000589064 AATFQ9NY61 560 aaKnown RBP eCLIP25.33■■□□□ 1.65
MBD3-205ENST00000589064 IRF6O14896 467 aa25.32■■□□□ 1.64
MBD3-205ENST00000589064 NPM3O75607 178 aaKnown RBP25.32■■□□□ 1.64
MBD3-205ENST00000589064 BAG3O95817 575 aa25.32■■□□□ 1.64
MBD3-205ENST00000589064 IFIT2P09913 472 aaKnown RBP25.32■■□□□ 1.64
MBD3-205ENST00000589064 ADGRA1Q86SQ6 560 aa25.32■■□□□ 1.64
MBD3-205ENST00000589064 TEX11Q8IYF3 940 aa25.32■■□□□ 1.64
MBD3-205ENST00000589064 ANTXR1Q9H6X2 564 aa25.32■■□□□ 1.64
MBD3-205ENST00000589064 AKAP11Q9UKA4 1901 aa25.32■■□□□ 1.64
MBD3-205ENST00000589064 IDH1O75874 414 aaKnown RBP25.31■■□□□ 1.64
MBD3-205ENST00000589064 NOM1Q5C9Z4 860 aaKnown RBP25.31■■□□□ 1.64
MBD3-205ENST00000589064 MYH2Q9UKX2 1941 aa25.31■■□□□ 1.64
MBD3-205ENST00000589064 ATRNL1Q5VV63 1379 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 PHF20L1A8MW92 1017 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 FKTNO75072 461 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 PPP4CP60510 307 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 MAP3K10Q02779 954 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 PPATQ06203 517 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 PPIL2Q13356 520 aa25.3■■□□□ 1.64
MBD3-205ENST00000589064 CTU1Q7Z7A3 348 aaKnown RBP25.3■■□□□ 1.64
MBD3-205ENST00000589064 CYP7A1P22680 504 aa25.29■■□□□ 1.64
MBD3-205ENST00000589064 SNAPC2Q13487 334 aa25.29■■□□□ 1.64
MBD3-205ENST00000589064 NOL9Q5SY16 702 aaKnown RBP25.29■■□□□ 1.64
MBD3-205ENST00000589064 CCDC85CA6NKD9 419 aa25.28■■□□□ 1.64
MBD3-205ENST00000589064 IGSF3O75054 1194 aa25.28■■□□□ 1.64
MBD3-205ENST00000589064 CETPP11597 493 aa25.28■■□□□ 1.64
MBD3-205ENST00000589064 CRHR2Q13324 411 aa25.28■■□□□ 1.64
MBD3-205ENST00000589064 OSBPL5Q9H0X9 879 aaPredicted RBP25.28■■□□□ 1.64
MBD3-205ENST00000589064 PLCG2P16885 1265 aa25.28■■□□□ 1.64
MBD3-205ENST00000589064 FAM43AQ8N2R8 423 aa25.28■■□□□ 1.64
MBD3-205ENST00000589064 DYNLL1P63167 89 aaKnown RBP25.27■■□□□ 1.64
MBD3-205ENST00000589064 MAGEB6Q8N7X4 407 aa25.27■■□□□ 1.64
MBD3-205ENST00000589064 TGFBRAP1Q8WUH2 860 aa25.27■■□□□ 1.64
MBD3-205ENST00000589064 RRP1P56182 461 aaKnown RBP25.26■■□□□ 1.63
MBD3-205ENST00000589064 MAP3K12Q12852 859 aa25.26■■□□□ 1.63
MBD3-205ENST00000589064 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.26■■□□□ 1.63
MBD3-205ENST00000589064 OTOFQ9HC10 1997 aa25.26■■□□□ 1.63
MBD3-205ENST00000589064 FAM196BA6NMK8 535 aa25.25■■□□□ 1.63
MBD3-205ENST00000589064 TBC1D12O60347 775 aa25.25■■□□□ 1.63
MBD3-205ENST00000589064 TAF1CQ15572 869 aaPredicted RBP25.25■■□□□ 1.63
MBD3-205ENST00000589064 MAPKAPK5Q8IW41 473 aa25.25■■□□□ 1.63
MBD3-205ENST00000589064 SCYL3Q8IZE3 742 aa25.25■■□□□ 1.63
MBD3-205ENST00000589064 LRRCC1Q9C099 1032 aa25.25■■□□□ 1.63
MBD3-205ENST00000589064 PICK1Q9NRD5 415 aa25.25■■□□□ 1.63
MBD3-205ENST00000589064 BTBD19C9JJ37 291 aa25.24■■□□□ 1.63
MBD3-205ENST00000589064 SMARCA5O60264 1052 aaPredicted RBP25.24■■□□□ 1.63
MBD3-205ENST00000589064 CTNND1O60716 968 aaKnown RBP25.24■■□□□ 1.63
MBD3-205ENST00000589064 MIGA1Q8NAN2 632 aa25.24■■□□□ 1.63
MBD3-205ENST00000589064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.24■■□□□ 1.63
MBD3-205ENST00000589064 KCNH4Q9UQ05 1017 aa25.24■■□□□ 1.63
MBD3-205ENST00000589064 DNAJC2Q99543 621 aaKnown RBP25.23■■□□□ 1.63
MBD3-205ENST00000589064 ZFYVE28Q9HCC9 887 aa25.23■■□□□ 1.63
MBD3-205ENST00000589064 ZHX2Q9Y6X8 837 aa25.23■■□□□ 1.63
MBD3-205ENST00000589064 GOLIM4O00461 696 aa25.22■■□□□ 1.63
MBD3-205ENST00000589064 PTPRAP18433 802 aa25.22■■□□□ 1.63
MBD3-205ENST00000589064 TTF1Q15361 905 aaPredicted RBP25.22■■□□□ 1.63
MBD3-205ENST00000589064 BOLA2Q9H3K6 86 aa25.22■■□□□ 1.63
MBD3-205ENST00000589064 EDC3Q96F86 508 aaKnown RBP25.21■■□□□ 1.63
MBD3-205ENST00000589064 DCTPP1Q9H773 170 aa25.21■■□□□ 1.63
MBD3-205ENST00000589064 PCDHB15Q9Y5E8 787 aa25.21■■□□□ 1.63
MBD3-205ENST00000589064 CXCL11O14625 94 aa25.21■■□□□ 1.63
MBD3-205ENST00000589064 PKN2Q16513 984 aaKnown RBP25.21■■□□□ 1.63
MBD3-205ENST00000589064 DHX36Q9H2U1 1008 aaKnown RBP25.21■■□□□ 1.63
MBD3-205ENST00000589064 PI4KBQ9UBF8 816 aa25.21■■□□□ 1.63
MBD3-205ENST00000589064 PALD1Q9ULE6 856 aa25.21■■□□□ 1.63
MBD3-205ENST00000589064 FLT1P17948 1338 aa25.2■■□□□ 1.63
MBD3-205ENST00000589064 AK9Q5TCS8 1911 aa25.2■■□□□ 1.63
MBD3-205ENST00000589064 ATP5JP18859 108 aa25.2■■□□□ 1.62
MBD3-205ENST00000589064 SP3Q02447 781 aa25.2■■□□□ 1.62
MBD3-205ENST00000589064 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.2■■□□□ 1.62
MBD3-205ENST00000589064 SAP30BPQ9UHR5 308 aaKnown RBP25.2■■□□□ 1.62
MBD3-205ENST00000589064 MOGSQ13724 837 aa25.19■■□□□ 1.62
MBD3-205ENST00000589064 SLC9C2Q5TAH2 1124 aa25.19■■□□□ 1.62
MBD3-205ENST00000589064 TMED8Q6PL24 325 aaPredicted RBP25.19■■□□□ 1.62
MBD3-205ENST00000589064 CD99L2Q8TCZ2 262 aa25.19■■□□□ 1.62
MBD3-205ENST00000589064 ZCCHC17Q9NP64 241 aaKnown RBP25.19■■□□□ 1.62
MBD3-205ENST00000589064 AFG3L2Q9Y4W6 797 aa25.19■■□□□ 1.62
MBD3-205ENST00000589064 COL2A1P02458 1487 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms